Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_10900 |
Symbol | |
ID | 8399638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1223954 |
End bp | 1224880 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644997163 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_003154528 |
Protein GI | 257068273 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.295076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCCT CCCGCCTGCT GATGGTGCCG GACGGGCTCG CGGGCGAGCG CGTGGACGTC GGCATCTCGC GCATGCTGGG CCTGTCCCGC ACCCGCGCCG CCGATCTCGT GACCGCCGGG CACGTGCTCG TGGACGGCCG CGCCCCCGCC CGCTCCACCC GCCTGGAGCC CGGGGTGATG GTGCACGTCG AGCTGCCGGA CGAGAAGCCG GCCGTCGAGG TGCGCCCGCA GATCGCCGAG GGCATGAGCC TGATCCACCA GGACGACGAC ATCGTGGTGA TCGACAAGCC CGTCGGCGTG GCCGCGCACC CCAGCGCCGG ATGGAGCGGG CCGACGGTGC TGGGTCACCT CGCCGCCGCC GGGGTGGAGA TCCGCACCAG CGGCGACCCG GAGCGACAGG GCATCGTCAG CCGCCTCGAC GTGGGCACGT CCGGGTTGAT GGTGGTCGCG CGCACCGAGC GCGCCTACAC CACCCTCAAG GACGCCTTCC GCGCCCGGGA GGTGGGCAAG GTCTACCACG CGATCTGCCA AGGCACCCCC GATCAGCCGC GCGGCACGAT CGAGGCGCCC ATCGGCCGCT CCCCGCAGCA CGACTACAAG TTCGCGGTGC GCGAGGACGG CAAGCACTCG GTCACCCACT ACGAGACCCT CGAGGAGCTG CAGGGGGCGA CGCTGCTGAG GATCGGGCTC GAGACCGGTC GCACCCACCA GATCCGCGTG CACATGTCCG CGCTGCACCA TCCGCTGGTG GGCGACCCGC TCTACGGTGC GGACCCGACG CTCGCCGAGC GGGTGGGGCT GATCCGCCAG TGGCTGCACG CGATGGAGCT GACGTTCGTC CATCCCGCGA CCGGGCGCGA GGTCACCTAT ACCTCGCAGT ACCCGTCGGA CCTGGCGCAG GCGCTGGAGG CGCTGCGGGG CCGCTGA
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Protein sequence | MSSSRLLMVP DGLAGERVDV GISRMLGLSR TRAADLVTAG HVLVDGRAPA RSTRLEPGVM VHVELPDEKP AVEVRPQIAE GMSLIHQDDD IVVIDKPVGV AAHPSAGWSG PTVLGHLAAA GVEIRTSGDP ERQGIVSRLD VGTSGLMVVA RTERAYTTLK DAFRAREVGK VYHAICQGTP DQPRGTIEAP IGRSPQHDYK FAVREDGKHS VTHYETLEEL QGATLLRIGL ETGRTHQIRV HMSALHHPLV GDPLYGADPT LAERVGLIRQ WLHAMELTFV HPATGREVTY TSQYPSDLAQ ALEALRGR
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