| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_00730 |
|---|
| Symbol | |
|---|
| ID | 8398623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 74743 |
|---|
| End bp | 76425 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644996171 |
|---|
| Product | ABC-type dipeptide transport system, periplasmic component |
|---|
| Protein accession | YP_003153547 |
|---|
| Protein GI | 257067292 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGG CATCCTTCAC CCGGCGCGGC GTCCTCGCCG CCACCCCGAT CGTCCTCGCC
ACCGGGGCGC TCGCCGCCTG CTCGAGCGGC GGCACCAGCA CCGGCTCCGG CTCCGACGGC
GGCGGGGAGG GCGGGGGCGG CAGCCTCACC ATCTTCACCA CCGGTGACGA GATGAGCTTC
GACCCCGCCA CCAGCCAGAA CCTCGCCATC ACCACGCTGG GCCTGACCGC CCGCCGCCTC
ACCGCGTGGA AGACCTCCGC CGATGCCCCC ACCGAGCTGA TCCCCGACCT CGCGACCGAC
GTCGGCACCC CCTCGGACGA CGGCGCGACC TGGACCTTCA CCCTTCAGGA GGGGCTGCAG
TTCGAGGACG GCACCCCGAT CACCGCCGCG ACCGTGAAGT ACGGCCTCGA GCGCTCCTTC
GCCTCCGAGC TCACAGGCGG GCTGACCTAC CACAAGGTGC TGCTCGAGGG CGGCCAGGAC
TACTCCGGCC CATTCTCCGG CGAGCACCTC GACTCGATCG AGACCCCGGA CGATCTCACG
CTCGTGTTCC ACCTCAACCG CCCCTACGGC GACTTCGGCT GGATCGCCTC GACGCCCGCC
TTCGCCCCGG TCCCCGAGGA CTCCGGCGAG CCCGAGACCT ACGCGACCGC ACCGGTGGCC
AGCGGCCCGT ACCGGCTGGA CTCCTACGCG CCCGGCAGCC GGGCCCTGCT CGTGCGCAAC
GAGAACTGGG ACGCGGCCAC CGACGAGGCC CGCACCGGCG GCCCCGACGA GATCGAGTTC
GCGCTCGCGC AGGATGCGAG CGTCGTCGCG CAGTCGATCA TCGCCGACCG CGCCGACTCG
CAGACCGCGT TCCTGGCGAG CTTCGTGCCC ACCGCCCAGC TGGTCCAGGC GCAGAACGAC
CCGAACGTCG GCGACCGGCT GGTCACCTCG GGGCCGGGCG CGCTCGAGTA CCTGGCGCTG
AACACGGAGT CGGAGGCGCT GCAGGACGTC GCCGTGCGCC GCGCCATCCA GTACGCCGTG
GACAAGCAGG CCTACCTCAC CTTTAAGGGC GGGGAGATCT CCGGCGACTA CGCCACCACG
CTGATCACCC CCGGCATCGC CGGCCGCGAG GAGTACTCCC TGTACTCCGA CGAGCCGGCG
GGCGACCCCG AGGAGGCCAC CCGGCTGCTC GAGGAGGCGG GCGCCGCGGA CCTGACCCTG
CGCCTGGTCA TCACCGACGA CCAGACCGGA GCCGCCGAGG CGATCCAGCA GGGCCTGGCC
CGCGCCGGGA TCACCGTGAC GATCCAGCCG CTGGACGACA ACGCCTACTC CTCCGAGGTC
ACCGCCGGGG ACGGCAGCGC CTACGACCTG GTGCTCAGCT CCTGGCAGCC GGACGTCCCC
TCCCCGAACG CGAACCTCAC CCCGCTGTTC GACTCGAGCC AGATCGGCAG CGGCAACTAC
AACCTCGCCC GCTACGACAA CCCCGAAGTG GACGCCGCGA TCCTCGAGGC CTCCTCGACG
GTCGACCCGG ACGAGGCGCA CGCGAAGTGG GCCGCCGTCG ACCAGCAGAT CCTCGAGGAG
TCCCCCGTGG TGCCGCTGAT CTACTCGAAG AACTCCTTCC TCCACGGCTC CGCCGTGGAG
AACTTCGTGA TCGGCGAGTT CCCGGCCTAC CCGAACTACC TCACGGTCAC GCTGAACGCA
TGA
|
|---|
| Protein sequence | MTSASFTRRG VLAATPIVLA TGALAACSSG GTSTGSGSDG GGEGGGGSLT IFTTGDEMSF
DPATSQNLAI TTLGLTARRL TAWKTSADAP TELIPDLATD VGTPSDDGAT WTFTLQEGLQ
FEDGTPITAA TVKYGLERSF ASELTGGLTY HKVLLEGGQD YSGPFSGEHL DSIETPDDLT
LVFHLNRPYG DFGWIASTPA FAPVPEDSGE PETYATAPVA SGPYRLDSYA PGSRALLVRN
ENWDAATDEA RTGGPDEIEF ALAQDASVVA QSIIADRADS QTAFLASFVP TAQLVQAQND
PNVGDRLVTS GPGALEYLAL NTESEALQDV AVRRAIQYAV DKQAYLTFKG GEISGDYATT
LITPGIAGRE EYSLYSDEPA GDPEEATRLL EEAGAADLTL RLVITDDQTG AAEAIQQGLA
RAGITVTIQP LDDNAYSSEV TAGDGSAYDL VLSSWQPDVP SPNANLTPLF DSSQIGSGNY
NLARYDNPEV DAAILEASST VDPDEAHAKW AAVDQQILEE SPVVPLIYSK NSFLHGSAVE
NFVIGEFPAY PNYLTVTLNA
|
|---|
| |