| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1603 |
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| Symbol | |
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| ID | 8398415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1744733 |
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| End bp | 1746397 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644995967 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003153345 |
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| Protein GI | 257067089 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000968128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAA AGTGGTGGCA GAAGGAAATT GTTTATCAGA TTTATCCTAG GTCTTTCAAG
GACTCGAACA ATGACGGGAT AGGAGATATT AGGGGAATTG TTGAAAAACT TGATTACTTG
AAGGACTTGG GCATTACTAT GATTTGGCTT TGCCCGATTT ATAAGTCCCC TATGGCCGAC
AATGGTTATG ACATTTCTGA TTATTTCGAT ATCAATGAAG AGTTTGGCAA CATGGAAGAC
TTTGATCTTT TGGTTGAAGA AGCGAAAAAA AGAGATATCA AGGTCATGAT GGACCTTGTC
CTAAACCACA CTTCCAACGA ACATGAGTGG TTTAAGGAGG CGATATCAGA TAAGGATAGT
CCTTACAGGA ATTATTATAT AATTAGAGAA GGGAAAGAGC CTCCAAACAA CTGGAGATCA
ATCTTTGGTG GATCTACCTG GACTAAGATT GATGGAGAAG ATGCCTATTA TCTCCACTCC
TTTGCCAAGG AGCAGCCAGA TCTCAATTGG GAAAACCCTA AGCTTAGAGA AGAAGTGATT
AATATCGTCA ATTTCTGGAT TGATAAGGGA ATTACAGCCT TTAGAATGGA TGCAATCAAC
CACATAAAGA AAGATCCTTC ATATAAAAGT GGAGATCCAG ACGGGGCTGA TGGCAGAGTT
TCTGTCGTAA AATTCGGTAG AAATCAAGAT GGAGTCGAAG AACTCATAAG GATCCTTTCA
GATAATACTT TCAAGATCCA CGATTCGATG ACTGTGGGCG AGACTGCTGG TCTTTCTTAT
GACAAGTATG CAAACTACAT CGGTGATGAT GGGGTATTTT CCATGGTATT TGACTTTATC
CCAGCAAACT TCGACGTGGT CGAAGAAACT TGGTACAAGA GACTTGACTG GAAGGTAAGT
GACTTTAGAA AGTCAATTTT CGATAGTCAA GAGTCAATCC AAAAATACGG CTGGTCAGCA
AATTTCATAG AAAACCACGA CCAACCAAGG GCTACTACCA AGATTTTAAG GGAAAAGGAC
GAGGATATTG ATGCTATAAA GATGCTTGGA GGAATTTATT TCTTCTTTAG GGGAACTCCT
TATATCTACC AAGGCCAAGA GCTCGGTATG AAAAACTTCG TAAGAGAATC ACCAGACGAC
TTCCAAGACA TCCAATCCAT AGACTCTTAT AAGAGATCGC TTGAAGAAGG ATTTAGCGAG
AAGGAAGCCC TCTACTTCAC CAACCTCAGA AGCAGGGACA ACCCAAGAGT TCCTTTCGCC
TGGACTAATG AAAAGTACGG AGGCTTCTCA GAAACTAAAC CTTGGCTTGC CATGGCCTAC
GATAATCCTA AAGTAAATGC TGAGGATGAA GAAAAGGATA AGGATTCTGT CCTAAACTTC
TACAAAAAAA TGATAGACTT TAGGCAAAAT AGCCAGTATT CTGATATCCT AATCTATGGA
GACTTCAAGC CTTTGGAAGG TTTTGATGAT GAAATAATAG CCTACGAAAG AATCCTAGAT
GGTAAAAAAC TAGAAATTAT CGCCAACTTC TCAGATGAAG AAAAGAAAAT AGAAGCAAGG
GGTAAGGATA TAATCTTTTC CAACTCAAAG GGAGAGATTG AAGGAGATAT CTTAAGCTTA
AATCCATATA GTTTTGTAAT ATTAAAGAAT AAAAATAATA AATAA
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| Protein sequence | MQKKWWQKEI VYQIYPRSFK DSNNDGIGDI RGIVEKLDYL KDLGITMIWL CPIYKSPMAD
NGYDISDYFD INEEFGNMED FDLLVEEAKK RDIKVMMDLV LNHTSNEHEW FKEAISDKDS
PYRNYYIIRE GKEPPNNWRS IFGGSTWTKI DGEDAYYLHS FAKEQPDLNW ENPKLREEVI
NIVNFWIDKG ITAFRMDAIN HIKKDPSYKS GDPDGADGRV SVVKFGRNQD GVEELIRILS
DNTFKIHDSM TVGETAGLSY DKYANYIGDD GVFSMVFDFI PANFDVVEET WYKRLDWKVS
DFRKSIFDSQ ESIQKYGWSA NFIENHDQPR ATTKILREKD EDIDAIKMLG GIYFFFRGTP
YIYQGQELGM KNFVRESPDD FQDIQSIDSY KRSLEEGFSE KEALYFTNLR SRDNPRVPFA
WTNEKYGGFS ETKPWLAMAY DNPKVNAEDE EKDKDSVLNF YKKMIDFRQN SQYSDILIYG
DFKPLEGFDD EIIAYERILD GKKLEIIANF SDEEKKIEAR GKDIIFSNSK GEIEGDILSL
NPYSFVILKN KNNK
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