Gene Apre_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1212 
Symbol 
ID8398001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1290829 
End bp1292067 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content38% 
IMG OID644995557 
ProductGTP-binding proten HflX 
Protein accessionYP_003152957 
Protein GI257066701 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGAG TTATACAAGT TAATGCAGTA GACAAGGACG ACGATCTCGA CAATAAGATC 
TATGAATTAG AGTCTTTGAT TAATACTGCA GGAGGAAAGA CTGAGGCCTA CGTATCTCAA
AAGGTAAGCA AGGTCAATCC TAGATATTAT ATAGGCAAGG GAAAGGTCGA AGAGATCATG
GATCTTGCCC AAAAAAACGA CATAGATACG GTAATATTTG ACGTAGAATT ATCAGCAAGT
CAGCTTTATA ATCTAGAAGA AGAGATGAAA CTTCACGTAG TGGACTGGAC AACTCTTATC
CTAGATATTT TTGCTATGCG TGCAAATACC AAGGAAGCAA GACTTAAGAT AAAGCTTGCC
CAATTAAAAT ATCAATTGCC AAGGATTAAC AAGTGGTTTT CCTACCTATC AAGACAGGCC
GGAGGAATCG GTACGAGGGG ACCTGGAGAG ACAATGCTAG AGACAGATAG GCGTGCTATT
GTAAGAGATA TCAAGTCTTT GGAAAAGGCT CTAAAGGATT TGGATAAGAC TAAAATGATA
AATAGAAAAT CGAGAAAGGA TATCCACAAT ATATCCCTAG TGGGCTATAC CAACGCAGGA
AAGTCTACAA TCCTAAATGG GATGCTGAAG CTTTTTGGTG AAGAAAAGTA TGTTTATTCG
GACGATTTGC TTTTTGCAAC ACTTGATACA TCGACTAGGA GATTAGATTT TTCTAATACC
AAGGTCACCT TGACAGATAC TGTAGGCTTT ATCGACAATC TCTCCAAGGA GCTTAATGAC
TCCTTCCTAA CAACCCTAGA CGAGGTTAGA TTTGCTGACA TGCTCCTTAT AGTCATCGAT
TCAAGCCACA ATATTGACCA TCAGATAGAG ACCATCGAAA ACTCTCTTGA AGGTATCGAT
GTTGGAAATA AAGAAATTCT TTATGTCTTT AACAAGATGG ATAGGGTAGA TGATGAGCTA
AGCGTAAGCC TATACAAGAG AGATAGCGAA AAAATCTACA TGTCAGCCCA CAAGGAAGAA
GACCTCATAA GACTTAAGGA GAAAATCGTA AAAATCATAA AGGAAGACTA CGAGCTTGTG
GAAATGGCAA TTCCATTTGA AGATGGTAGG GTCCTAGACT ATATCATGAG TAATTACGAT
ATTATAGAAA GGGACTATGA TCCAACTTCT AGCATATTGA AACTAGAAAT AAGCAAAGAG
GACTATTCGA AATATGACAG ATATATTAAA AAAGTATAG
 
Protein sequence
MQRVIQVNAV DKDDDLDNKI YELESLINTA GGKTEAYVSQ KVSKVNPRYY IGKGKVEEIM 
DLAQKNDIDT VIFDVELSAS QLYNLEEEMK LHVVDWTTLI LDIFAMRANT KEARLKIKLA
QLKYQLPRIN KWFSYLSRQA GGIGTRGPGE TMLETDRRAI VRDIKSLEKA LKDLDKTKMI
NRKSRKDIHN ISLVGYTNAG KSTILNGMLK LFGEEKYVYS DDLLFATLDT STRRLDFSNT
KVTLTDTVGF IDNLSKELND SFLTTLDEVR FADMLLIVID SSHNIDHQIE TIENSLEGID
VGNKEILYVF NKMDRVDDEL SVSLYKRDSE KIYMSAHKEE DLIRLKEKIV KIIKEDYELV
EMAIPFEDGR VLDYIMSNYD IIERDYDPTS SILKLEISKE DYSKYDRYIK KV