Gene Apre_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0492 
Symbol 
ID8397268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp563749 
End bp564501 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content36% 
IMG OID644994850 
Productglutamate racemase 
Protein accessionYP_003152260 
Protein GI257066004 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGGA TTGGAGTTTT TGATTCAGGT CTCGGAGGTC TTACTGTCCT TAGGGAGCTT 
GCCAAAACGA ACAAGAGTCA GTATTTTTAT TTCGGAGATA GCTTGAGAGT TCCCTACGGG
GGAAGGAGTG AAGAAGAGCT TAGGAGATTT TCTGCTGATA TTGTAGATTT TCTAGAGAAA
TTCGATATAG ACTATTATGT CATAGCTTGC AACACTCTTT CTGTTACTGT AACTGACTTT
CTTAGAGAAA AATACGACAA GAAATTTATT CCCATAACAG AACTTGCCCT TAAGGCTAGT
GAAAAATACC AAGGTAAATT CCTGGTTCTA GGAACCAAGA CTACAATAAA CAGCCATTTT
TACAAGAATA ATCTAGAAAA AAATCCCCGA AATACAGTCT ATGAGGTTGC TGCAAGTAAA
CTCGTCGATT TGATAGAGGC TGATAAGAAA GATGATAAGA AGTTAAACGA ATACATAGAT
TCCTATATAA AGATTGCCAA TGATAAGAAA ATCGAAAATA TCCTCCTAGC CTGCACCCAT
TATCCTATAA TAAGGGAGAA CATCGAGAGA AGGCTAGATT ATAAGGCTAA TATTATTGAT
CCTGCAATCT TTTTAAGCCA GAGTCTAGAA AGTGCGAGCG ATGATTTGGA TATTAATATA
TTTATGTCCA AGAAGACTCC CGCCACAGAG AATTTGATAC CAAAACTTAT GGATTTTCCC
TATAAGCTAA ATTATTTGAA GGAGGGCTTA TGA
 
Protein sequence
MTRIGVFDSG LGGLTVLREL AKTNKSQYFY FGDSLRVPYG GRSEEELRRF SADIVDFLEK 
FDIDYYVIAC NTLSVTVTDF LREKYDKKFI PITELALKAS EKYQGKFLVL GTKTTINSHF
YKNNLEKNPR NTVYEVAASK LVDLIEADKK DDKKLNEYID SYIKIANDKK IENILLACTH
YPIIRENIER RLDYKANIID PAIFLSQSLE SASDDLDINI FMSKKTPATE NLIPKLMDFP
YKLNYLKEGL