Gene Ksed_24870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24870 
Symbol 
ID8373990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2567878 
End bp2568519 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content75% 
IMG OID644992713 
Productthymidylate kinase 
Protein accessionYP_003150216 
Protein GI256826256 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTAG CCGGGCACGG TCTCTTCGTC GCCCTGGAGG GGGGTGACGG GGCCGGCAAG 
TCCACGCAGA TCAGGCTGCT CGTGGAGCAC CTTGCGGGCC AGCACGCCGG GCGGGAGGTG
GTGGTGACCC GGGAACCGGG CGGGACCGAC CTCGGCCGCC GCATCCGCGA GCTGCTGCTG
CACGGTGACC ACGTGGCTCC GCGTGCCGAG GCCCTGCTCT TCGCCGCCGA CCGGGCCCAC
CACGTCGAGT CCCTGGTGCG TCCGGCGCTG GACCGTGGCG CGGTGGTGGT GGGCGACCGC
TACGTCGACT CCTCGATTGC CTACCAGGGC GCCGGCCGGG ACCTCGATGC GGTGGAGGTC
GCCTCCATCT CCCGCTGGGC CACCGAGGGC CTGGTGCCGG ACCTGACCGT CCTGCTCGAC
GTGGACCCGG CCACCGGGCG GAGCCGCCGC GGGGCGGAGC ACGACCGGCT GGAGGCGGAG
CCGACGGCCT TCCACGAGCG GGTGCGGCAG CACTTCCTGG ACCTCGCGGC CGCGGCGCCG
CAGCGCTACC TGGTGCTCGA TGCCTCCCGG CCGCCGCAGG AGCTGGGCGC CGAGGTCGCC
CGGGCCGTCG ACGGGCTGCT GGAGGGGGTA CTCCGTGCGT GA
 
Protein sequence
MTVAGHGLFV ALEGGDGAGK STQIRLLVEH LAGQHAGREV VVTREPGGTD LGRRIRELLL 
HGDHVAPRAE ALLFAADRAH HVESLVRPAL DRGAVVVGDR YVDSSIAYQG AGRDLDAVEV
ASISRWATEG LVPDLTVLLD VDPATGRSRR GAEHDRLEAE PTAFHERVRQ HFLDLAAAAP
QRYLVLDASR PPQELGAEVA RAVDGLLEGV LRA