Gene Ksed_21870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21870 
Symbol 
ID8373691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2261936 
End bp2263111 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content69% 
IMG OID644992431 
Productacyl-CoA dehydrogenase 
Protein accessionYP_003149937 
Protein GI256825977 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.10506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.934225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA CCCGATTGAT GCCGACCCCC GAGTCGGAAG ACCTCATCGC CCTCGTCCGC 
GACATCGCCG CCAAGGAGGT GGCGCCCAAG GCCGACCGGT ACGAGAAGAA CGCCGAGTTC
CCCGCCGAGG TGTTCCACAC CCTGGGCGAG GCCGGCCTGC TCGGCCTGCC CTTCGACGAG
GAGTTCGGCG GTGCGAACCA GCCGTACGAG GTCTACCTGC AGTGCATCGA GGAGCTCTCC
AGCGCCTGGA TGGCCATCGG TGTGGGCGTC TCCATCCACG TGCTGACCTG CTTCCCCATC
AACAGCTACG GCACCCAGGA GCAGAAGGAG CGCCTGCTGC CGAGCATGAT CGGCGGCGAG
TGGTTCGGCT CCTACTGCCT CTCGGAGCCG GCTGCCGGCT CGGACGTCGC CTCCATGCGC
ACCAAGGCCG TTGGCTCCGG TGACGTGGAC GAGACCGGCC GCAGCGAGGA GTACGCCATC
AGCGGCGGCA AGATGTGGAT CTCCCACGCC GGCCACGCGG ACTTCTACAC CACCTTCGCC
CGCACCGGGG AGAACGACGG CAAGGGCATC AGCTGCTTCC ACGTTCCCGG TGACGCCCCC
GGCCTCACCT TCGCCGAGCC CGAGCGCAAG ATGGGCCTGC ACTCCGACAC CGTGCGCGAG
GTGCTCTACG ACAAGGTCAC CGTGCCGGGC GAGAACCTCA TCGGCACCCC CGGCAAGGGC
CTCGGCATCG CGCTGGCGGC GCTGGACTCC GGACGCCTCG GCATCGCCGC CGCCTCCACC
GGGCTGGCAC AGGCCGCCAC CGACCTCGCG CTGAAGTACG CCGCGGAGCG CCAGCAGTTC
GGCAAGCCGA TCGCCGAGAA CCAGGGCCTG CAGTTCATGC TCGCCGACAT GCAGGCGCAG
ACCAGCGCCG CCCGCGCGAC CTACCTGCAC GCCGCCCGTC TGAAGGACGC CGGCAAGAAG
TTCAGCCGCG AGGCCGCGAT CGCCAAGCTG TTCGCCTCGG ACACCGCCAT GAAGGTGACC
ACCGACGCCA TCCAGGTGCT CGGCGGCTAC GGCTACACCA CCGACTTCCC GGCCGAGCGC
TACTTCCGCG ACGCCAAGAT CACCCAGATC TTCGAGGGCA CCAACCAGAT CCAGCGCATG
GTCATCGCCC GCGACATGCT CAAGTCCCTG GGCTGA
 
Protein sequence
MAVTRLMPTP ESEDLIALVR DIAAKEVAPK ADRYEKNAEF PAEVFHTLGE AGLLGLPFDE 
EFGGANQPYE VYLQCIEELS SAWMAIGVGV SIHVLTCFPI NSYGTQEQKE RLLPSMIGGE
WFGSYCLSEP AAGSDVASMR TKAVGSGDVD ETGRSEEYAI SGGKMWISHA GHADFYTTFA
RTGENDGKGI SCFHVPGDAP GLTFAEPERK MGLHSDTVRE VLYDKVTVPG ENLIGTPGKG
LGIALAALDS GRLGIAAAST GLAQAATDLA LKYAAERQQF GKPIAENQGL QFMLADMQAQ
TSAARATYLH AARLKDAGKK FSREAAIAKL FASDTAMKVT TDAIQVLGGY GYTTDFPAER
YFRDAKITQI FEGTNQIQRM VIARDMLKSL G