Gene Ksed_12250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12250 
Symbol 
ID8372733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1253967 
End bp1254554 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content65% 
IMG OID644991502 
Producttranslation initiation factor 3 
Protein accessionYP_003149025 
Protein GI256825065 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.109497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.154931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCGGCC CCAACGGCGA ACAGGTCGGC ATCGTGCGCG TCAAGGACGC CCTGCGTCTG 
GCAGCCGAGG CCGACTTGGA TCTCGTGGAG GTCGCTCCCA TGGCCAAGCC CCCGGTCGCC
AAGCTCATGG ACTACGGCAA GTTCAAGTAC GAGAACGCCA TGAAGGACCG TGAGTCGCGC
AAGAAGCAGG TCAACACGGT CATCAAGGAG ATCAAGCTCC GGCCGAAGAT TGACCAGCAC
GACTACGAGA CCAAGAAGGG TCACGTCGAG CGCTTCCTGG CCGCGGGCGA CAAGGTCAAG
GTCACCATCA TGTTCCGTGG CCGTGAGCAG TCCAAGCCCG AGCTGGGCTT CCGCCTGCTG
CAGCGGCTGG CGGAGGACGT GACCGAACTG GGCGTCGTCG AGAGCAAGCC CAAGCAGGAC
GGCCGCAACA TGACCATGGT GTTCGGTTCG ACCCGCAACA AGGCGCAGGC CCAGGCGGCC
CGCCGCAAGG AGCAGGAGCA GAAGAAGCGG GAGCGCAAGG GCCCCGAGTC GGAGGCTCCC
GAGCAGGACG CGGCCGAGAC CGCAACCGAG GCTCCCGCAG AAGCCTGA
 
Protein sequence
MVGPNGEQVG IVRVKDALRL AAEADLDLVE VAPMAKPPVA KLMDYGKFKY ENAMKDRESR 
KKQVNTVIKE IKLRPKIDQH DYETKKGHVE RFLAAGDKVK VTIMFRGREQ SKPELGFRLL
QRLAEDVTEL GVVESKPKQD GRNMTMVFGS TRNKAQAQAA RRKEQEQKKR ERKGPESEAP
EQDAAETATE APAEA