| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_12200 |
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| Symbol | |
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| ID | 8372728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 1244014 |
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| End bp | 1247151 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644991497 |
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| Product | M6 family metalloprotease domain-containing protein |
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| Protein accession | YP_003149020 |
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| Protein GI | 256825060 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0570513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.178376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGG TCTCTGCCGT CCCGTCCCAG GACGGCCAGA CCTCTCACGA GCACCGCAAG
GACGACCTTC CGCACCCGCT GGGCGACAAG CAGCGGGCCA TGAAGGACGA GGCCATCAAG
CAGCTCATCA AGGGTGACGC CAAGATTGTC ACCAAGAGCG GGAGCCGCTC CATCCAGCTG
GGTGAGGGCG CCGAGAAGCA GTTCGTGCAG TACGACGTCG AGCGCACCGA GAACGTGCTC
ACGATCCTCA CCGAGTTCGG TGACGAGATC GACCCGCGCA CCGGTGGCGA GCCCGGCCCG
CTGCACAACC AGATCGCCGA GCCGGACCGC TCGGAGGACA ACACGACCGT CTGGCAGGAC
GACTTCAACA CCGACTACTA CGACGAGTTG ATGTTCGGCG AGGAGGACTC CTTCCGGCAC
TTCTTCCAGA AGCAGTCCAG CGGTCGCTTC GACGTCCAGG GTGGTGTGTA CGACTGGGTG
GAGGTGCCCT TCAACGAGGC GCGTTACGGC TCCCCGAACA TCCCCGAGTC GGACGGCTAC
TGGAACTACG TCAAGGACAG CGCCGAGGCC TGGTACAACG ACCAGGTCGC GCAGGGCAAG
ACCACGGCCG AGATCCAGGC CGAGCTGGCC CAGTACGACG TCTGGGACCG GTACGACTAC
GACGGTGACG GTGACTTCAA CGAGCCCGAC GGCTACATCG ACCACTTCCA GGTCGTGCAC
GCTGGCGAGG ACGAGTCCGC TGGTGGCGGC GCCCAGGGCG AGGACGCCAT CTGGGCCCAC
CGCTGGTACG CGTTCCCCAC CCTGCAGGGC CAGGCGGGTC CGGAGGGCAA CCTGATGGGT
GGTGTGCCGA TCGGTGACAC CGGCCTGTGG ATCGGTGACT ACACCACCGA GCCGGAGAAC
GGTGGCCTCG GCGTGTTCGT GCACGAGTTC TCGCACGACC TCGGCCTGCC GGACTACTAC
GCGACCGACG GGGGCGACAA CGGCGCCGCG TTCTGGACGC TGATGTCGGC GGGCTCCTGG
CTGAACAAGG GTGAGGAGTC CATCGGCTCC TCCGCGGGCT TCATGGGCCC CAAGGAGAAG
CTGCAGCTCG GCTGGCTGGA CTACGAGACG GTGCAGCCCG GCGAGAGCAC CACCAAGACC
CTCGGCCCGG CCTACCACGC GACCAAGAAC CCGCAGGCCA TCGCGGTCCC GCTCCCGGAC
AAGGAGATCG TGGACCAGTA CAACACCCCG TTCGAGGGTG AGTACGAGTA CTGGAGCGGT
TCGGCCAACA ACCTGAACAG CTCCATCTCC ACCACGATTG ACCTGACGGC CGCGAGCTCC
GCCAGCGTCT CGGCCAAGGC CGAGCACTTC ATCGAGGCGG ACTACGACTA CCTGTACGCC
GAGGTCTCCA CCGACGGTGG GGCCACCTGG GCCAAGCTCG CTGAGATCTC CGGGGACAGC
GATGGGTGGA CGGACCTGTC CTACGACCTG GACGAGTACG CCGGGCAGGC TGTCGACTTC
CGCTTCCGCT ACCAGAGCGA CGGTGGCGTG AACGAGAACG GCGCCTTCCT GGACAACCTC
ACGGTCACGG TCGACGGTGA GTCCACCGTC GACGGCGCCG AGGGTGAGCC CACCTGGACG
CTGGACGGAT TCACGAAGAT CGACGGCAGC GTCACGCGCA ACGAGAGCCA CTTCTACCTG
ATGGAGAACC GTCAGTACGG CTCCTACGAC GAGTCGCTGC GCACGGGTCC GTACAACTTC
GGTTTCGGTG CCGCGCAGCC CGACTGGGCC GAGCGCTTCC CCTACCAGAA CGGCATGCTC
GTCTGGTACA GCAACGACGA GTACGCCGAC AACAACACCG CGACGCACCC TGGTGGCGGT
CAGTCCCTGC CCGTCGACGC GCGTCCCGAG GCCCTCGCCT GGGCCGACGG CACGCTCATG
CGCAACCGCA CCCAGACGTT CGACGCCACC TTCGGCCTCG AGCGCACGGA CGCGGTCACG
CTGCACAAGA ACGGTGAGCC CACCGAGATC CCGGCCCGCG ACGCCGAGCC GGTCTTCGAG
GACACCGGGG AGAACGCCTA CTACGACCCG TCCAACCCCG AGAACTCGGT GAAGCTGCCG
GGTTCGGGCG TCCGTGCGCA GGTGCTCTCC ACCGACGGTC ACACGATGGA GGTCTGCTTC
GGCGCCGCCG ACAACTGTGA CGCCGCTGCT CCGGAGGTCG CCGTCGACCG CTGGTGGGGC
GACGACCGCT ACGGCACGGC CGCCGAGGTG GCCAAGCAGA CCGGTCCGAG CGACACCGTC
TACCTGGCCG CCGGTGACAC GTTCGCCGAC GCCATGACGG CCAGCCCGGC TGCCGCCAAC
GGCAACGTGC CGAAGCAGAT GTCGATCCCG GAGCAGGACG GCGAGAACGC CCCCATCCTG
CTGACCCGTG AGAACCGGAT CCCGGCCGAG ACCCTGGACG CGCTCGAGGC CCTGGCGGCC
AAGAACGTCG TCATCCTCGG TGGCGAGTCC GCGATCTCCT CGGGTGTCGC CTCCGAGCTC
GAGGGCATGG GCCTGAAGGT CGAGCGCGTG GGCGGTGCGG ACCGTTACGA GACGAGCGCC
AACGTCGCCA AGATGTTCGG TACGAACGTT GACACGCTGT ACATCGCCTC GGGTGAGGAG
CGTGCCTTCG CGGACGCCCT GACCGGTTCC GCGCTGGCCG GTTCGCAGGA CGCCCCCGTC
CTGCTGACCA AGCCGGGCGA GGTCGAGCAG ACCACCGCCG ACGCGGTGGC CGCGCTCAAC
CCCGAGAAGA TCGTCGTGCT GGGTGGCCCC GCGGCCATCT CGGACGCGGT CTACAACGAA
CTGGGCGCCA CCGAGCGCTT GGCGGGCTCC GACCGCTACG CGACGGCCGC CAAGGTTGCC
GCCGAGTTCG GTGTCGACCC CAACTACGCC CTGCTGGCTG ACGGGACCGA CTTCCCCGAC
GCCCTCACTG GTGGCGCCTA CGCCGGGTTC CAGCACAGCC CGCTGCTGCT GACCCGTCCG
GACCGCCTGC CGGCCGTGAC CGAGACGCAG CTGAACGAGA CCTCCCCCGA GCACATGGTG
ATCGTGGGCG GTACGGCGGC CGTGGCGCAG TCGATCGAGG ACCAGCTCAA CGAGCTGGTC
GGTGGGTGGA TGAACTGA
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| Protein sequence | MAQVSAVPSQ DGQTSHEHRK DDLPHPLGDK QRAMKDEAIK QLIKGDAKIV TKSGSRSIQL
GEGAEKQFVQ YDVERTENVL TILTEFGDEI DPRTGGEPGP LHNQIAEPDR SEDNTTVWQD
DFNTDYYDEL MFGEEDSFRH FFQKQSSGRF DVQGGVYDWV EVPFNEARYG SPNIPESDGY
WNYVKDSAEA WYNDQVAQGK TTAEIQAELA QYDVWDRYDY DGDGDFNEPD GYIDHFQVVH
AGEDESAGGG AQGEDAIWAH RWYAFPTLQG QAGPEGNLMG GVPIGDTGLW IGDYTTEPEN
GGLGVFVHEF SHDLGLPDYY ATDGGDNGAA FWTLMSAGSW LNKGEESIGS SAGFMGPKEK
LQLGWLDYET VQPGESTTKT LGPAYHATKN PQAIAVPLPD KEIVDQYNTP FEGEYEYWSG
SANNLNSSIS TTIDLTAASS ASVSAKAEHF IEADYDYLYA EVSTDGGATW AKLAEISGDS
DGWTDLSYDL DEYAGQAVDF RFRYQSDGGV NENGAFLDNL TVTVDGESTV DGAEGEPTWT
LDGFTKIDGS VTRNESHFYL MENRQYGSYD ESLRTGPYNF GFGAAQPDWA ERFPYQNGML
VWYSNDEYAD NNTATHPGGG QSLPVDARPE ALAWADGTLM RNRTQTFDAT FGLERTDAVT
LHKNGEPTEI PARDAEPVFE DTGENAYYDP SNPENSVKLP GSGVRAQVLS TDGHTMEVCF
GAADNCDAAA PEVAVDRWWG DDRYGTAAEV AKQTGPSDTV YLAAGDTFAD AMTASPAAAN
GNVPKQMSIP EQDGENAPIL LTRENRIPAE TLDALEALAA KNVVILGGES AISSGVASEL
EGMGLKVERV GGADRYETSA NVAKMFGTNV DTLYIASGEE RAFADALTGS ALAGSQDAPV
LLTKPGEVEQ TTADAVAALN PEKIVVLGGP AAISDAVYNE LGATERLAGS DRYATAAKVA
AEFGVDPNYA LLADGTDFPD ALTGGAYAGF QHSPLLLTRP DRLPAVTETQ LNETSPEHMV
IVGGTAAVAQ SIEDQLNELV GGWMN
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