Gene Ksed_10190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_10190 
Symbol 
ID8372528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1047100 
End bp1048509 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content67% 
IMG OID644991300 
ProductH+/gluconate symporter family protein 
Protein accessionYP_003148829 
Protein GI256824869 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG2610] H+/gluconate symporter and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.438603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGGAC TGATCGGAGT GGTGCTCTCG CTGGCACTGC TCATCTACTT CGCCTACAAG 
GGCTACAGCA TCATCCTGCT GGCCCCGGTC ACGGCCCTGG TGGCCGGCAT CTTCGCCGGT
GCACCGCTCA TGGCCATGTA CACCCAGGTG TTCATGCCGG CCATGGGTGG CTTCCTCATC
ACCTACTTCC CGCTGTTCCT GCTCGGTGCC TTGTTCGGCA AGCTCATGAA CGACTCGGGC
TCGGCCTACT CCATCGCGCG CTTCATCGTG GAGCGGGTCG GTGCCAAGCA CGCCGTGCTG
GCCGTGGTGA CGGCCTGCGG CATCCTCGCC TACGGCGGCG TGACGGTCTT CGTCGTCGTG
TTCGCCATCT GGCCCATCGC GCGCGAGCTG TTCCAGGAGG CGGGCATCCC CAAGCGCTTC
GCGCCGGCCG CCATCGGCCT GGGTTCGTTC TCCTTCGCCA TGACCGCCAT CCCCGGCACC
CCGCAGATCC AGAACGCCAT CCCGGCGCCC TACTTCCAGA CCGACGCGTT CGCCGCACCC
GGTCTGGGCC TCATCGCCGG CGCCATCATG TACGTGGGCG GCGTGCTCTA CCTGAACCGC
CGCGTGGCGG CAGCACAGGC CAAGGGCGAG GGTTACGACA ACGGCGCTCT CATGCAGGGT
GAGCAGACCA CCGGGATCGG TCAGGAGGAC GAGGTCACGG TGCCCACCAC CACCCCGTTC
TGGGTGGCCA TGCTCCCCAT CGTCCTGGTC ATCACGCTGA ACTTCCTGCT GGTGCGCTAC
ATCTTCGACC TGTTCGACTT CTCCTACCTG GCCGAGGAGA AGTTCAAGGC CACGTCCATC
GACAAGGTCG GCGGCATCTG GGCCATCATC ATCTCGCTGC TGGTGGCCTG CCTGCTGGTG
CTGGCACTGA ACTGGAACCG TCTGCGTGAG CGCAAGAAGC TGCTCAACCA GGGCGCCTCC
AGCTCGTTCC TGCCCATCAT GAACACGGCC TCTGAAGTCG GCTACGGCGC CGTGATCGCG
GCCCTGCCGG CCTTCGCCAT CATCCGTGAC GGGGCCTTCG GGGTGTCCTC CAACCCGGCG
GTCTCGCTGG CCGTCTCCAC CAACATCGTC GCGGGCATCA CCGGCTCGGC CTCCGGTGGT
CTGTCGATCG CCATGAACGC CTTCGGTGCG GAATACGCCG CCAAGGCGGC CGAGGCCGGC
ATCGATCCCG AGTTCATGCA CCGCGTGGCC TCCCTGGCCG CCGGTGGCTT CGACGCCTTG
CCCCACAACG GTGCCGTCAT CACGGTGCTG GCCGTGACGG GGCTGACGCA CCGCCAGTCC
TACAAGGACA TCGGCGTGGT CTGCGTGCTG ATCCCCATCG TCGCGCTCGC GGTGGTGCTG
GCCCTCGGGT CGGCCGTCGG TTCGTTCTGA
 
Protein sequence
MLGLIGVVLS LALLIYFAYK GYSIILLAPV TALVAGIFAG APLMAMYTQV FMPAMGGFLI 
TYFPLFLLGA LFGKLMNDSG SAYSIARFIV ERVGAKHAVL AVVTACGILA YGGVTVFVVV
FAIWPIAREL FQEAGIPKRF APAAIGLGSF SFAMTAIPGT PQIQNAIPAP YFQTDAFAAP
GLGLIAGAIM YVGGVLYLNR RVAAAQAKGE GYDNGALMQG EQTTGIGQED EVTVPTTTPF
WVAMLPIVLV ITLNFLLVRY IFDLFDFSYL AEEKFKATSI DKVGGIWAII ISLLVACLLV
LALNWNRLRE RKKLLNQGAS SSFLPIMNTA SEVGYGAVIA ALPAFAIIRD GAFGVSSNPA
VSLAVSTNIV AGITGSASGG LSIAMNAFGA EYAAKAAEAG IDPEFMHRVA SLAAGGFDAL
PHNGAVITVL AVTGLTHRQS YKDIGVVCVL IPIVALAVVL ALGSAVGSF