Gene Shel_27060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27060 
Symbol 
ID8396594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2990097 
End bp2992898 
Gene Length2802 bp 
Protein Length933 aa 
Translation table11 
GC content64% 
IMG OID644987448 
Productcell division membrane protein 
Protein accessionYP_003145054 
Protein GI257065382 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.358527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGCC GTACCACCGA GCTTCTGCTG CTCTGCCTGG CAGCCCCCAT CGTGCTGCTG 
CTGTTCGCCA GCATCCTCAT GCACGACGGC CTTGCCCTGT CCGTGGAATC TCTGGCCGTG
CCCATCGGCC TGTTCGCCGC CTTCGTGGTG GCTCACGTGG CCGTGCGCAT CTTCGCCAAG
AACGCCGACC CGGCCATCCT GCCCATCGCC TTCGCACTTT CGGGCATCGG CATCGCATTT
GTCACACGAC TCGCTCCTGA CCTGGCAATA CGCCAGGTCG TCTGGCTGTT TGCCAGCATC
ATCTGCATGG TTGTCGTGCT GGCGGCCGTC CGCAACTTGG ACCGCCTCAT CCGGTACAAG
TACACGCTCA TGCTGGTCGG CATCATCCTG CTCATCTCGC CGATGCTCCC CGGCATCGGC
ATGGAGGTCC TGGGCAGCCG CATTTGGCTG CACATCGGCC CCTTCAGTTT CCAGCCCGGC
GAAATCGCTA AGGTTTGCAT CATCTTGTTT TTGGCCGGAT ACCTGGCCCA GAACCGCGAG
ATGCTGTCGG TCTTCACCGT GCGCGTAGGC CGCTTCCGCA TTCCGGATCT GGCCACCCTG
CTGCCGTTGC TGCTCATGTT CGCCATCTCG TTCCTCATCG TCGTGTTCGA GAAGGATCTG
GGCTCGGCTC TGGTCTGCTA CGTCCTGTTC CTGGTCATGC TGTATGTGGC CAGCGGCCGA
AAGCTCTACC TGGTCGTGGG CTTCGGCCTG GCCGGCATCG GCGCCGTTGC GCTGTACATG
CTGTTCGGCC ACGTGCAGAT TCGCGTCAAC ACCTGGCTCG ACCCCTTCTC CGATGCCCAG
AACACCGGCT ACCAGCTGTG CCAGTCCATC TACTCGATGG CCGACGGCGG CATGCTGGGC
GTCGGTGTCG GAAACGGCCT GGCTCAATAC ATCCCCGTCG TGGAATCCGA CTTCATCTTT
GCCGCCATCG CCGAGGAAAT CGGCCTGTTG GGCGGCGCGG CGGTTCTGCT GCTCTACCTG
TCGCTGGCCA TCCGAGGTTT CGCCACGGCG GCCCGCGCGA AAAGCGACGT CTCCGCACTG
GTGGCCGTGG GCTGCACCAC CGTCATCGTG CTCCAGGCCT TCATCATCGT GGGCGGCGTC
ACGCGCCTCA TTCCGCTGAC CGGCCTGACC CTGCCCTTCA TCAGCCAGGG CGGCTCCTCG
CTTCTGGCCA CCTTCATCGA GATAGCCCTG TTGCTGCGCT GTGGCGACGA GGGCACCGGC
CTGACCAGCG AAATGACCGA CGGCACTCGC GCCATGAAGC CCATCGGCTC GCACGCCAGC
CTCGCCGATG ACTCCGGCGT GCTGGGCCGC GTGGCCTTGG GCAAGCGCCT GACCGCCTGC
ATGGTAGCCT TCGCCCTGCT GTTCGCCGCG TTGGTCGCCA ACCTGACCTA CGTCATGATC
GTCAAGGCCG ACGACTACCA GAGCTATCCG GGCAACAACC ATACGCTATA CACCGAGGCG
AAGACCGAGC GCGGCTCCAT CTCAACCTAC GACGGCGTGG TGCTGGCCCA AAGCGTCCGC
CAGGACGACG GCACCTACGT GCGCGAATAC CCGCAGGGTT CCATGGCGAG CCACGTGGTG
GGCTACTACT CGCAGCAGTA CGGCCTGTCA GGTATCGAAG CCTCCATGAA CGACGCCCTC
AAGGGGCAGT CCAACTACGC CACCTGGCAG GACGTCGTCG ACAGCATGGC CGGCATCGAG
TCGCCGGGCA ACGACGTAAC CCTGACGCTG AACTCCGAGA TCCAAACCCT GGCCGAGCAG
CAGCTGGAAG GCTACGCCGG CGCCATCGTG GTTATGGATC CGTCCACCGG CGCCATTCTG
GCCTGTGCCA GCGCACCCAC CTACTCCAAC GACCAGATCG ATGCGATCCT GGCAGGCGAA
GGTTCCGACG GCGCGCTGGT CAACCGCGCG ACGGGCGCCC TGTACGCTCC GGGCTCCACC
TTCAAGGTGG TTTCGCTGGT GGCCGCCATC GAAAACGACG TGGCCGACGG CGACACGCTC
ATCGAGTCCC CCGCCGAGAT GGAAATCGGC AACGCCAGCG TCACCAACCT GCATGACTAC
GACTACGGCC AGATCACGCT GGCAGAGGCC TTGGCAGTGT CCTCCAACAC CGCCTTCGCC
CAGCTGGGCG TGGATGTCGG CGCCGAGAAC CTGGTCGCAA CCTCCGAGGC CTTCGGATTC
AACCGCGTGC TCAACGGCTT CGAGCTGCCG CTGACCACCA GCCTTATGCC CGACCCCGAC
GAGATGACCA CGTGGGAAAC CGCCTGGGCC GCCGTGGGTC AGCCCGTCGG CGAGCACGAG
AGCCCCGCCG GCCCGCAGGC CACGGTCCTG CAGATGGCCA TGGTGGCTTC GGCCATCGCC
AACGACGGCG TGCTCCAGCA GCCGTATTTT GTGGAAGGTG TATACAATGC CGACGGCGAG
CGGAGTTATG CCGCCACGCC GCGTTCATTG GGCACTATTA TGAGTAAGAG CACCGCAGAA
GAAATGACCG ACATCATGAT CGGCGTGGTC GAAGACGGCA CGGGTACCGA CGCCGCCGTC
TACGGCACGA CAGTCGCCGG CAAAACCGGC ACCGCCGAAA CCGGCAAGGA GAACCCGGAC
AGCTGGTTTA TCGGGTTCGC CCCCGCCGAC AACCCCACCG TGGTTGTGGC CGTCCTGATA
GAGGAAGGCG TCAACTACAG CACCGACGAC ATGGCCGGTC TGGCCAGTGC CCGTGCCTCG
GTCATCATCG AGCGCACGCT CGAGCTGGAA GGGGTGCTAT GA
 
Protein sequence
MSRRTTELLL LCLAAPIVLL LFASILMHDG LALSVESLAV PIGLFAAFVV AHVAVRIFAK 
NADPAILPIA FALSGIGIAF VTRLAPDLAI RQVVWLFASI ICMVVVLAAV RNLDRLIRYK
YTLMLVGIIL LISPMLPGIG MEVLGSRIWL HIGPFSFQPG EIAKVCIILF LAGYLAQNRE
MLSVFTVRVG RFRIPDLATL LPLLLMFAIS FLIVVFEKDL GSALVCYVLF LVMLYVASGR
KLYLVVGFGL AGIGAVALYM LFGHVQIRVN TWLDPFSDAQ NTGYQLCQSI YSMADGGMLG
VGVGNGLAQY IPVVESDFIF AAIAEEIGLL GGAAVLLLYL SLAIRGFATA ARAKSDVSAL
VAVGCTTVIV LQAFIIVGGV TRLIPLTGLT LPFISQGGSS LLATFIEIAL LLRCGDEGTG
LTSEMTDGTR AMKPIGSHAS LADDSGVLGR VALGKRLTAC MVAFALLFAA LVANLTYVMI
VKADDYQSYP GNNHTLYTEA KTERGSISTY DGVVLAQSVR QDDGTYVREY PQGSMASHVV
GYYSQQYGLS GIEASMNDAL KGQSNYATWQ DVVDSMAGIE SPGNDVTLTL NSEIQTLAEQ
QLEGYAGAIV VMDPSTGAIL ACASAPTYSN DQIDAILAGE GSDGALVNRA TGALYAPGST
FKVVSLVAAI ENDVADGDTL IESPAEMEIG NASVTNLHDY DYGQITLAEA LAVSSNTAFA
QLGVDVGAEN LVATSEAFGF NRVLNGFELP LTTSLMPDPD EMTTWETAWA AVGQPVGEHE
SPAGPQATVL QMAMVASAIA NDGVLQQPYF VEGVYNADGE RSYAATPRSL GTIMSKSTAE
EMTDIMIGVV EDGTGTDAAV YGTTVAGKTG TAETGKENPD SWFIGFAPAD NPTVVVAVLI
EEGVNYSTDD MAGLASARAS VIIERTLELE GVL