| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25100 |
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| Symbol | |
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| ID | 8396398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2776823 |
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| End bp | 2778481 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644987255 |
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| Product | thioredoxin reductase |
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| Protein accession | YP_003144866 |
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| Protein GI | 257065194 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase
[COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase
[TIGR03143] putative alkyl hydroperoxide reductase F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.19765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CCAAGAACCT TTACGATGCG GTCGTCATCG GCGGCGGTCC TGCCGGCTTG
ACTGCGGCGA TCTATTTGTC TCGCGCCCGC TACCGCACGC TTGTGGTAGA GAAGGATCGC
ATCGGCGGCC AGATCACCAT CACCCATGAG GTCGTCAATT ACCCTGGCGT GCTCGCAACC
ACCGGCGAGG CCCTTACCCG CACCATGCGC CAACAAGCGG AAGGTTTCGG CGCCGAGTTC
AAAATCGCCG AGGTCACAAA CCTTGACATG GACCCCAACG AAGACGGTGT CAAAATCGTC
CACACCGACA AAGGGGACAT CGCCTGCCAT GCCGTATTGA TGGCCACAGG CGCCTCTCCC
CGCCTCGCAG GATTTGAAGG TGAAGAAGAT TTCCAGGGCC ACGGCGTTGC CTATTGCGCC
ACTTGCGACG GAGAATTCTT CACCGGAAAA GAAGTGCTTG TGGTGGGCGG AGGATTCGCC
GCGGCCGAAG AGGCTGTCTT CTTGACGAAG TACGCCAGCC ACGTGACCAT TCTGGTGCGC
AAAGACGACT TCTCCTGCGC TGCCTCGGTG TCCGAACCCG CCAAAACCAA TCCCAAGATT
ACCATCCGAT ACAATACCCG TATCGCCAGC ATCGCAGGCG ATACGGCCCT GCGCTCCGCC
GTGCTGGAGA ACACCAAGAC CGGCGAGCGG GAGACTTGGA AGCCCGCAGG CGACAACGAG
ACGTTCGGCG TCTTCGTCTT CGCAGGCAAC ACCCCCGCCA CCGAGCTCGC AAACGGCATC
GCCGAGGTTG ATGATCGCAA GTTCATCGTC ATCGACGAGC ACAACATGAC CACCAAGCCC
GGCTTGTTCG CCGCAGGCGA CGTTTGCAAC AAAGCCCTCC GTCAGGTTGC TACGGCCGTG
GGAGAAGCCG CCAGCACCGC TTCCGAAATG GAGCGCTACA TCAAGGCTCA GCAGGAAGCC
ACAGGGCTTA CCCCCCAGGT AAAGGAACCC GAGCAGCTGC CCGCGGCCCC TGCGAAGGCA
GAACCTGCAG CAGCGAAGAC CCAACCCGGC GGCCTGTTCA CCGGCGATGT GCTAGCCCAG
CTCAATGCCG TGTTCGCTCG CATGGAAACC CCGTTGGTCC TAAGGCTCTC CCTGGACGAC
CGCCCCGTTT CCACGGAGCT GCGTGGCTAC ATGGAGGAAC TGGCGAAGCT TACCGACAAG
CTCTCCGTAG ACATCGTCGT TGCACCCGAA GGGGACGACT TGCCCAAGGT CGAACTGTGC
CGAGCTGATG GAGCCTGGAC CGGACTCGCT TTCCATGGCG TGCCCGCCGG CCACGAGTTC
ACTCCTTTCG TCTTGGGTTT GTACAACGCC TCCAGCGCCG GCCAGGCCAT CGAGGACGCC
GACAGGGCTG CCGCCTACGC CATCGACCGC AAGGTGGACA TCACCGTAGC CATCGGACTG
AGCTGCACCA TGTGCCCCGA TTTAGTCCAA GCCTGCCAGC GTATCGCAAC GCTGAACGAC
AACGTTACCG CCCAGGTCTA CGATGTGGCC CACTTCCCCT CCCTGCAGCA GAAGTATGAC
ATCATGAGCG TGCCCTGCCT GATCATCAAC GATGGGGAGA AGGAAACCGT CGAGTTCGGC
CGCAAGAACA TCAGCGGCGT TCTCGAGCTT ATCGGCTAA
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| Protein sequence | MTDTKNLYDA VVIGGGPAGL TAAIYLSRAR YRTLVVEKDR IGGQITITHE VVNYPGVLAT
TGEALTRTMR QQAEGFGAEF KIAEVTNLDM DPNEDGVKIV HTDKGDIACH AVLMATGASP
RLAGFEGEED FQGHGVAYCA TCDGEFFTGK EVLVVGGGFA AAEEAVFLTK YASHVTILVR
KDDFSCAASV SEPAKTNPKI TIRYNTRIAS IAGDTALRSA VLENTKTGER ETWKPAGDNE
TFGVFVFAGN TPATELANGI AEVDDRKFIV IDEHNMTTKP GLFAAGDVCN KALRQVATAV
GEAASTASEM ERYIKAQQEA TGLTPQVKEP EQLPAAPAKA EPAAAKTQPG GLFTGDVLAQ
LNAVFARMET PLVLRLSLDD RPVSTELRGY MEELAKLTDK LSVDIVVAPE GDDLPKVELC
RADGAWTGLA FHGVPAGHEF TPFVLGLYNA SSAGQAIEDA DRAAAYAIDR KVDITVAIGL
SCTMCPDLVQ ACQRIATLND NVTAQVYDVA HFPSLQQKYD IMSVPCLIIN DGEKETVEFG
RKNISGVLEL IG
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