Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_24860 |
Symbol | |
ID | 8396374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2751605 |
End bp | 2752477 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644987232 |
Product | DMT(drug/metabolite transporter) superfamily permease |
Protein accession | YP_003144843 |
Protein GI | 257065171 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATACA AGCTGCTCCT CGTGCTCGCC ACCCTCATCT GGGGCAGTTC GTTCGTCATG GTGAAGGACC TGACCGACGT CATGGCGCCC GCATGGCTGC TCGCCATCCG CTTCGTCGCA GCGACGGTGG TGATGGCTGC GGTCTGCCTG GTACGGCGCG AGCCCCTGTT CGACCGCGAA CACATCAAAT ACGGCATCAT CATCGGGCTG CCACTTTTCA TGGGATACCT GTTCCAAACG ATAGGCATCA CCGACACAAC GCCAGGCAAG AACGCTTTCC TCACAGCGAC CTACTGCGTC ATCGTTCCAT TCTTGACCTG GGCCGTCGAT CGAAAGCGCC CGAACCGTTT CAACATCGTG GCCGCGCTGC TGTGCCTGTC GGGCATCGGG CTCATCAGCC TGACCGGCAG CTTCACCATC GGATTCGGCG ACGCCATGAC CCTGTGCTGC GCCGTCTTCT ACGCGGTGCA GATCCTGTTC ATGTCCAAAT TCGGCAAGGG ACGCAACGTC GTCGTGCTCA CCGTCTGGCA GTTCGCCACC GTAACGGCAG GCAGCCTTAT GGTCGCCCTC GTGTCGGCCG AGCCGCCGAC ACCAGCTGCC ATGACCCCTG GCGTGTGGTT GTCCTTTGCC TACCTGGCTT TTATCGTGAC GGCGCTGGCC GTCTTCGTGC AGAACATCGG CCTTGCCAAT GTGGAGCCGG CCACCGGCGG CCTGCTGCTA TCGCTGGAAT CGGTGTTCGG CGTGGCCTTC AGCATCGCCC TGGGCCGCGA GCCGCTCACG CCGCGCATCC TCGTCGGATT CGTGGTCGTG TTCGTCGCCA TGGTGGCTTC CGAATACCTG CCCGCCAAGT TGGAACGTCG CCGAACATCC TAA
|
Protein sequence | MKYKLLLVLA TLIWGSSFVM VKDLTDVMAP AWLLAIRFVA ATVVMAAVCL VRREPLFDRE HIKYGIIIGL PLFMGYLFQT IGITDTTPGK NAFLTATYCV IVPFLTWAVD RKRPNRFNIV AALLCLSGIG LISLTGSFTI GFGDAMTLCC AVFYAVQILF MSKFGKGRNV VVLTVWQFAT VTAGSLMVAL VSAEPPTPAA MTPGVWLSFA YLAFIVTALA VFVQNIGLAN VEPATGGLLL SLESVFGVAF SIALGREPLT PRILVGFVVV FVAMVASEYL PAKLERRRTS
|
| |