Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_20950 |
Symbol | |
ID | 8395984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2326139 |
End bp | 2326789 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644986844 |
Product | haloacid dehalogenase superfamily enzyme, subfamily IA |
Protein accession | YP_003144455 |
Protein GI | 257064783 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGC GCACCATCGA TGCGTTCGTC TTCGACCTGG ACGGAACGCT GCTGCACACC CTGCCCGATC TGATCGCCGT CACCAACGAG TCGCTGCGGC ATTTCGGGAT GCCCGAACAC GACGACGCGG CCATCCAATC CTTCGCCGCG AACGGGGCCG TCGCCCTCAT GCTGCAGGCA GTTCCCAATA ATTGCAGCCC TGAACTGGCA CAAGAGGCGC TTGCCTACTG GAAGGCAACA GCGTTGGACC ACGGCGCGTT GCTGTCTCGC CCCTTCCCCG GTGTGGTCGA AACGCTTGGG CGGCTACACG AGGCAGGCAA GCAGCTTGGC GTGCTGTCGA ACAAGTTCCA GGCGGGTGTG GACGACCAGC TGGCGCACAA CCTTCCCGAC CTGTTCGACG TGGCGTTGGG AGACGGCAGC GTGCCCCGCA AGCCCGATCC CACCGGCATG TTGGAGACGG CGCGGCGCCT GGGCGTGGCT CCCGAGCGCA TGGCATACGT GGGCGACTCC GTCGGCGACA TGCAGGCGGC CGTCAGAGCA GGAGCGCTAG CCGTAGGCGT GACCTGGGGA TACCACCCTG TCGAGCAGAT CAAGGCAGCC GGTGCCGACA TGCTGCTCGA CACGCCGGAG CAGCTTCTCA CACTGATCTA G
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Protein sequence | MPKRTIDAFV FDLDGTLLHT LPDLIAVTNE SLRHFGMPEH DDAAIQSFAA NGAVALMLQA VPNNCSPELA QEALAYWKAT ALDHGALLSR PFPGVVETLG RLHEAGKQLG VLSNKFQAGV DDQLAHNLPD LFDVALGDGS VPRKPDPTGM LETARRLGVA PERMAYVGDS VGDMQAAVRA GALAVGVTWG YHPVEQIKAA GADMLLDTPE QLLTLI
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