Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_20860 |
Symbol | |
ID | 8395975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2316713 |
End bp | 2319541 |
Gene Length | 2829 bp |
Protein Length | 942 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644986835 |
Product | anaerobic dehydrogenase, typically selenocysteine-containing |
Protein accession | YP_003144446 |
Protein GI | 257064774 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCGA TCGGCGCATT CCTAATTGAA GGCAACGAGA AAAAGGGAGA AGAGGAGGAA GATATGGCAA AATCGACAGT AACCCGACGC GGATTCATGA AGGCGGCCAC CGCCTTCTCG GCAGCATTTG CCGGCGCCGT CGCCGTGGGC TGCACCCAGA CCGAAGAGCA GCCCGCCGAG ACGACCGCTG AATCCACCGG CGAGGTCGAA CCCATTCCCG ATGTAGAGGC GAACGACGAA ATCATCTGTT CGTCGTGCCG CGCCTGCATC AGCAACTGCG GCGTGCTCGT CCATGTGCGC GACGGCCGCG TCGTGAAGAT CGAAGGTGAC GAACGCGACC CCATGAGCAA GGGCGCCGTC TGCGCCAAGG GCCTCGCGGC CGTCCAGGCG CTGTACAACC CCATGCGCAT GAAGTACCCC ATGAAGCGCG CCGGCGAACG CGGCGAGAAC AAGTGGGAGC GCATTTCCTG GCAAGAGGCT GTGGACACCA TCGTCGACAA GCTGATGGAA GTCTACGAGA AGGACCCGAT GCAGCTGGTC ATCTCTACCG GCGGCGGCGG CAACCCGCAG TTCTTCGGCC TGCACCGCTT CCTGCAGGCC TTCGACGGCG GCAACTTCTT CGAGCCTGGC TGCGCCCAGT GCTACCTGCC CCGCATGTGC ACCCAGCCTC TGCTGAACGG CTGCAACGAC ACGTCCATCT CCGACTCCAC GGTCGGCGAG ATCTACTGGA CCGAAGCCGA GCCCACCTGC ACCGTGCTGT GGGGCGCCGA TCCCAGCCAG AGCCACGTGA CCTCCGGCGG CCGCGCCATG GTCGAACTGC GCGAGCGCGG CACCAAGACC GTGGTCATCG ACCCGCGCTT CACGCCTGAC GCCGCCAAAG CCGACGTGTG GCTGCCCATC CGCCCCGGCA CCGACGTGGC CATGGGCCTG GGCTGGGTCA ACTACATCAT GTCCAACAAC CTCTACAACG AGGAATGGTG CAAGCAGTGG ACCAACCTGC CCTTCCTGAT CAACGAAGAG ACCAAGCTGC TCTATCACGC CGATGAACTG GGTCTGGGCG AAGCCACCGA TTACGTGGTA TGGGACCAGG ATGCCAACGC GCCTGTGGCC ATGCCCTACC CCACCGACAT GTCCATCAAC TTCGCTCTGG ACGGCGAATT CGACGTGGAC GGCAAGAAGA GCCGCACGGC ATACCGCGCC ATCTGGGACG TCGCCGAAGA GTGGACGCTT GAGAAGACTG CCGAAATCAC CTGGTGCGAG GCCGAATCCA TCGAAGCCGC CGTCAAGATG TACGTCGAAG GCGCTCCGCA TTCCGGCATC GGCATCGGCG TGGCTACCGA CCAGTACGAG CAGTCCGCAC AGGCACCCGA GGTCGTCACC ATCATCGAGA GTCTCATGGG CAACGCTTGC CACCAGGGCA ACACCATCCA GAGCCGTAAG AACCAGTCTC TGGGCACCTA CTTCCTGTTC CCGTTCAACC TGTTCGGCCC CAACGAGCTC GGTCCGAACG AGGACACCGT CAATCGCCGT CTGGGCGTCA TCGAGCACAA GGGCCTGAAC TACTGGATGG CTTCCCACAT CCCCACCGTC ATGAACGCAG CTGCCACGGG CGAGCCCTAT CAGCCGCAGG TGTGGATCGA CCGTTCCGGC AACAAGCTGG CCATGGTCGG CGACGCCACC ACGTTCCGCG AGAGCATGAT GAACATCCCG TTCATCGTCC ACATGGGCTT GAACATCTCC ACCACCTCCG TCGAGCTGGC AGACATCATC CTGCCCACGG CCGAGTGGCT TGAGACCGCC TACGGCGCGG ACCGCTGCAA CGTGTGGTTC ATCCGCCGCG ACATCGTGCA TCTGTTCGAG CACATCGACG AGACCTTCAT CTGGGCCATG TTCGTCGCAG CCCTGGCCGA CCGCGGCCAC GAGAAGTGCC AGAAGACCTA CGACCCCGAG CTGTGCGGCC CGGCCGGCCC CTACTGGCGC ACCTACGACG ACTACAAGGC ATATCTGGCC GGCTTCATGT CCAACAGCTT CGGCGAGCAG TGGACCTGGG AAGAGGCCTG CGAGAAGCTG CCTGCCGAGT TCACCACCCT GGAAGACTGG ATCACCAGCT CGTATGAGTC CTATGAGAAG GAAGGCGAGG ACGGCTTGCC CGCCGGCTTC GCGACCAACT CCCGCCGCAT GGAGCCCTAC GCCGAGGCCA TGACCATCGC CGGCCGTACC GGCGGCCCCA AGGGCGGCGA CTGGTGGGAC GGCTACGTGC TGCCGCCGGC AAGCGTCGAC TACGAGCCCG TTCCCCATTA CGTCGAGCCA GCCGAGAGCC CGCTTGATGA CGAAGAGTAC CCGTTCGTGC TCACCGAGGG CCGCGTGCCC ATGTACCATC ACGGCACGCT GCGCAACGTC CCGTGGCTGC GCGAGATGTA CCCCGTGCCG CGCACTTGGA TCAACCCCGC CACCGCCGCC GAAATCGGCG TTGCAGACGG CGACTGGGTG AACGTTGAAA GCCGCCGCGG CAAGATCTAC GGCCAGGCCC TGCTTACCGA AGGCGTGGCG CCGAAGGTCA TCTACCAGGA ACGCTTCTGG AACCCCGAGC TGCTGGACTC CGACGACCCC AGCCAGGCTT GGAAGCTTAT GAACGTGAAC ATCCTGACCA AGAACGACGC TCCGTACAAT CCGGAGTTCG GCACGTACAC GCTGCGCGGC TTCACCGTCA ACGTGACCAA GGCCGACAGC GCGCCCGAAG GCATCTGGAT GAACCCGAAG GACTTCGAGC CGTGGCTGCC TGAGTACACT GAGGAAACGG GAGGAGGTTA TGCCGTCTAT GACGCGTAA
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Protein sequence | MRPIGAFLIE GNEKKGEEEE DMAKSTVTRR GFMKAATAFS AAFAGAVAVG CTQTEEQPAE TTAESTGEVE PIPDVEANDE IICSSCRACI SNCGVLVHVR DGRVVKIEGD ERDPMSKGAV CAKGLAAVQA LYNPMRMKYP MKRAGERGEN KWERISWQEA VDTIVDKLME VYEKDPMQLV ISTGGGGNPQ FFGLHRFLQA FDGGNFFEPG CAQCYLPRMC TQPLLNGCND TSISDSTVGE IYWTEAEPTC TVLWGADPSQ SHVTSGGRAM VELRERGTKT VVIDPRFTPD AAKADVWLPI RPGTDVAMGL GWVNYIMSNN LYNEEWCKQW TNLPFLINEE TKLLYHADEL GLGEATDYVV WDQDANAPVA MPYPTDMSIN FALDGEFDVD GKKSRTAYRA IWDVAEEWTL EKTAEITWCE AESIEAAVKM YVEGAPHSGI GIGVATDQYE QSAQAPEVVT IIESLMGNAC HQGNTIQSRK NQSLGTYFLF PFNLFGPNEL GPNEDTVNRR LGVIEHKGLN YWMASHIPTV MNAAATGEPY QPQVWIDRSG NKLAMVGDAT TFRESMMNIP FIVHMGLNIS TTSVELADII LPTAEWLETA YGADRCNVWF IRRDIVHLFE HIDETFIWAM FVAALADRGH EKCQKTYDPE LCGPAGPYWR TYDDYKAYLA GFMSNSFGEQ WTWEEACEKL PAEFTTLEDW ITSSYESYEK EGEDGLPAGF ATNSRRMEPY AEAMTIAGRT GGPKGGDWWD GYVLPPASVD YEPVPHYVEP AESPLDDEEY PFVLTEGRVP MYHHGTLRNV PWLREMYPVP RTWINPATAA EIGVADGDWV NVESRRGKIY GQALLTEGVA PKVIYQERFW NPELLDSDDP SQAWKLMNVN ILTKNDAPYN PEFGTYTLRG FTVNVTKADS APEGIWMNPK DFEPWLPEYT EETGGGYAVY DA
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