| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_16890 |
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| Symbol | |
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| ID | 8395579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1896112 |
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| End bp | 1899168 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644986443 |
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| Product | anaerobic dehydrogenase, typically selenocysteine-containing |
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| Protein accession | YP_003144057 |
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| Protein GI | 257064385 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAC TGAACATGAC GCGCCGTTCG TTCGTCAAGA GCGTCGCCGC GTCTGCCGCA
GCTGCCGCAC TCGTCGGATC CGCCGCTCCC ATCACGGCGC TGGCAGAAAA CGAGAATGCA
GCAACTACGG AATCCACCGT TACCCGCATT CGCTCGTGCT GCCGTGGCTG CGGCAAAGTC
GAATGCGGCG TGTGGGTATA CGTTCAGGAT GGCAAGGTCA TTCGCAGCGA AGGCGACCCG
GATTGCTACC TGACCATGGG AAACCATTGC GCCAAGGGCC AGGCGTCCAT CCAGGCCGCG
TACCATCCCG ACCGCATCAA GTATCCCATG AAGCGTACGA ACCCCAAGGG CGACGACGAT
CCCGGCTGGG TCCGCATCTC TTGGGATGAG GCGTACCAGA CCATCGCAGA CAACATTCTC
GAGATTACGG AAAAGTACGG TCGCGAGTCC ACGTTCTCTT GGTGCGGCAC CGGCCGCCAG
TGGTGCATGC AATCCGACGC CGGCATGGCG CTTTTGCTGT TCGGTTCGCC GAACATCGTC
GCTGCCTACC AGGTGTGCAA GGGCCCGCGC CACTTCTCGT CGCGTATCGA CAACATGCAG
GCTTGGTCCT GGAGCGAGGT CATCAACCAT TCCACCAAGT TCGTGCAATG GGCGACCGAG
CAGTCCCAGT CCAACTACGA CGACGCCGCC CGTACCGTCG TCGACGTGGC CCGTTGCGCG
GACGCCTTCA TCAGCATCGA CCCCCGTCAG ACCAACCTCG GCCGTACCGC CAAATACTGG
CTGCCCATCC GTCCCGGTAC CGACTCAGCT CTAGCCTTGG GCTGGTGCCA TCTGATTCTT
GAGAACGACC TGTGCGACTA CCAGTTCATC AAGCGCTGGT CCAACGCGCC GTTTATCGTG
GTGCCCGACA TGGATGCCAC TGGCTACACC GAGGCCGTTC TCAACGGCGG GTACCCCTAC
ACCTATCAGA CCCGCCTTCT CACCGAGGCC GACATCGATC CCGAGATGGT GGATTGGGAG
ATCGAAGGTG ACGGCGACCC GCAGCGCTAC CTGGTGTACG ACCAGCTCAA CGAGCGCTGG
ACGTACTGGC AGGCCCATCC CGAGGTGGGC GGCGCCCACT GGGAGGGTGA AGACTGGCAG
CGCCCCGACA TCTCCGAGGC CTGGGACCAG GATCTGTCCC GTCTGCGCGA CGACGAGTCC
AAGAAGCCCG GCCACATCTT CGACCTGTCC GAATTCAACC CGCTGATCGA CCCCGCCCTG
CACGGCGAAT TCGAAGTCAA GCTGAAGGAC GGCACCACCC ATACCGGCCG TCCCGTGTGG
GACTTGTGGG CTGATTACCT GGAAGGATTC ACCCCCGACG TGGTTGCCGA CATCACCGGC
GTCGACGAGA ACCTTATCGT CGATTCCTGC CTCGAATGGG CGACCCGCGA CGACCCGCGC
CTGCCCAACA GCGGCATCAA CTACGGCTTG GCCATCGAGC ACCACGGCAA CTCCACGCAG
AACTGCCGTG CCATCATGGC GGCATGCGCT ATGGTCGGCG CCATCGACAC CCCGGGCGGC
CAGCGCGGCG CAACCGTGGG TTGGACCACC CAGTCCGGTC CTACGTCCAT GTATCCTGGA
TCCGACTTCT CGCCGCTGCC GTTCAGCCGT TTCCCCATGG ACATCTACCA CCGCATCGCC
GGTTACGAGA AGTTCCCCAT GCTGTACTGG TACGCCGTTT GGGCGGACGC CAACACCGTT
ATGGAATATG CGCATCGTGA CGGCAACGCC CCTTACGAGG TCCATGGCGG CATGATCGGT
TCCGGCGACC ATATGAACAT GGCCAACGCT TCCTACAACT GGGAGGCCTT GAACATGCTC
GACTTCCTGT TCGAAGCCAA CCTCTGGCAT TCTCCCACGT CCGGCGCCGC AGACATCCTG
CTGCCCGTCA GCCACTGGAC CGAAATGAAC GCAACGCGCA TTGCCCAGGG CGCCGGTGGA
TCGTTCAGCC TGTGCGTCCG CGCGGTCGAT CCTCCGGGAG AAGTCAAGTC CGACCCGCTG
TACTTCATGG AGCTCGCCCC GTACTTCGGC GTCAACTCCT CGGGCGATCC CGACGACCCC
TACTGGCTGA AGAAGAAGGA AGAGACCGGC AAGGACCTGG ACATCCTGGC TCTTGAGCAT
GAATGCTTCA ATTATGAGAT GGGCGGCGGC TGCGCTCCCT ACGAGTCCTG GGAGGAATTC
GTCCAGGCGT ATCAGGAGCA TGGCACGTGG AACATGAAGG AAGTGTTCCC GACCGATTGG
GGCGTCTACC GCCGTTACGA GTACGGTCAG GCCTACCGCA AGCCGCCTCA TCAGAAACCG
GCGCTGCTCG ACATCAACAT CCCGGGCTTC ACGACGCCTA CCATGAAACA CGAGTTCTGG
TCGACCGCTA TCGAATCGCA CTTCCCGAAC GGCTCCGACG GCCCGGAGAT CCTGCCCGGA
TTCCACACCG AGGCGCTGCC GTACTACGTC GAAGGCATCC ATTCCGAGCG CCGCGACCCC
GAGCTGTACA AGGAATACCC CATCCTGTGC ATCACCGGCC GCCGCATCCC GGTGTACTTC
CACTCCGAAC ACCGCCAGCT TCCGTGGTGC CGCGAGCTCT GGCCCGTGCC GCGCATGGAG
ATCAATCCCG TCACGGCGAA GGAGCTCGGT CTTGAGCAGG GCGATTGGGC TTGGATCGAA
TCTCCGTGGG GCAAGGTCCG CCAGACGGTC GACCTGTACT ACGGCATCCG CCCGAACATG
ATCAACGCCG AACATCAGTG GTGGTATCCA GAGCTTGCCC AGGCCGACAA GGGCTTCCAA
CTGTCGTGCA TCAACTGCAT CGTGGACCGC ACGGCCCAGG ACAAGTACAA CGGTTCGTCC
ACCGTCCGCG GATATCCGGT CAAGGTTTAC AAGGCAACCC CCGAGAACAG CCCCTTCGGC
AATCCGGTTC CCTGTGGCAA TGACGGCACC GAGATCATCC ACGACTCCAG CGACCCGCGC
CTGAAGCTTT GGGTCATTGG CGGCGAAGGC ATCAACCCTG ACCATTTCGA GGACTAG
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| Protein sequence | MGKLNMTRRS FVKSVAASAA AAALVGSAAP ITALAENENA ATTESTVTRI RSCCRGCGKV
ECGVWVYVQD GKVIRSEGDP DCYLTMGNHC AKGQASIQAA YHPDRIKYPM KRTNPKGDDD
PGWVRISWDE AYQTIADNIL EITEKYGRES TFSWCGTGRQ WCMQSDAGMA LLLFGSPNIV
AAYQVCKGPR HFSSRIDNMQ AWSWSEVINH STKFVQWATE QSQSNYDDAA RTVVDVARCA
DAFISIDPRQ TNLGRTAKYW LPIRPGTDSA LALGWCHLIL ENDLCDYQFI KRWSNAPFIV
VPDMDATGYT EAVLNGGYPY TYQTRLLTEA DIDPEMVDWE IEGDGDPQRY LVYDQLNERW
TYWQAHPEVG GAHWEGEDWQ RPDISEAWDQ DLSRLRDDES KKPGHIFDLS EFNPLIDPAL
HGEFEVKLKD GTTHTGRPVW DLWADYLEGF TPDVVADITG VDENLIVDSC LEWATRDDPR
LPNSGINYGL AIEHHGNSTQ NCRAIMAACA MVGAIDTPGG QRGATVGWTT QSGPTSMYPG
SDFSPLPFSR FPMDIYHRIA GYEKFPMLYW YAVWADANTV MEYAHRDGNA PYEVHGGMIG
SGDHMNMANA SYNWEALNML DFLFEANLWH SPTSGAADIL LPVSHWTEMN ATRIAQGAGG
SFSLCVRAVD PPGEVKSDPL YFMELAPYFG VNSSGDPDDP YWLKKKEETG KDLDILALEH
ECFNYEMGGG CAPYESWEEF VQAYQEHGTW NMKEVFPTDW GVYRRYEYGQ AYRKPPHQKP
ALLDINIPGF TTPTMKHEFW STAIESHFPN GSDGPEILPG FHTEALPYYV EGIHSERRDP
ELYKEYPILC ITGRRIPVYF HSEHRQLPWC RELWPVPRME INPVTAKELG LEQGDWAWIE
SPWGKVRQTV DLYYGIRPNM INAEHQWWYP ELAQADKGFQ LSCINCIVDR TAQDKYNGSS
TVRGYPVKVY KATPENSPFG NPVPCGNDGT EIIHDSSDPR LKLWVIGGEG INPDHFED
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