Gene Shel_10720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10720 
Symbol 
ID8394963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1226651 
End bp1227736 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content59% 
IMG OID644985830 
Productprotein RecA 
Protein accessionYP_003143456 
Protein GI257063784 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000907009 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000149755 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCACGTA ACTCACAACC GAAAAACATT TCGGACATCG ACAACAAGGA CGTGGCGTTG 
AAAAACGCTA CGGAGCAGAT CAATAAGAAG TTCGGCAAAG GTGCCATCAT GAAGCTTGGC
GAAGATGCCG AAAAGCTGGA GGTCGGCGTC ATTCCCACAG GTGCGCTTTC GCTGGATGCT
GCATTGGGTA TCGGCGGCGT GCCACGTGGC CGAATCATCG AGGTCTACGG CCCCGAGGCA
AGCGGCAAAA CCACGCTGGC TCTGCAGATT CTTGCAGAGG CCCAGGCCGC AGGCGGCATC
GCTGCGTTCA TCGATGCGGA GCACGCCCTC GATCCAACCT ATGCGGCCCG CTTGGGCGTA
GACATAGATG AGTTGCTCAT TGCCCAGCCG AGCACCGGCG AAGAGGCGCT TGAGGTCTGC
GACATGCTGG TGCGTTCCAA CGCCATCGAC TGCATCGTTA TCGACTCCGT CGCGGCTCTG
GTGCCACGTG CAGAAATCGA AGGCGAAATC GGCGACGCAA GCGTCGGCCT GCAGGCACGT
CTCATGTCCC AGGCATTGCG CAAGCTTGCC GGCTCGCTGT CTAAATCGAA TACCACGTGC
ATCTTCATCA ACCAGCTGCG TGAGAAGATC GGCGTCATGT TCGGCAATCC CGAAACCACT
ACGGGCGGCC GTGCCCTGAA GTTCTTCGCC AGCGTTCGTA TCGACGTGCG CCGTATCGAA
ACGTTGAAGA ACAAGAGCAA CGAGCCCTGC GGCAACCGCG TGCGTGCCAA GGTCGTCAAG
AACAAAGTGG CTCCGCCGTT CCGTCAGGCC GAGTTCGACC TCATGTACGG AACCGGCATT
TCTCGCGAAG GCTGCATTCT CGACATGGGC GTCGAAGCGG ACGTCGTCAC CAAGAGCGGC
TCGTGGTACA CCTATGGCGA AGAGCGCCTG GGCCAGGGTC GCGATGCCGC TAAGGAGATG
CTGCGCACCA ATCCCGACCT GCGCGACGAG ATCGAAGCCA AGGTGCGGGA ATACTTCGAC
ATTCCGATGC CCGGCCAATC GGTGACCGTT GATGTGGCCG AAGAGAACGC TGGCGGCTTG
GAATAG
 
Protein sequence
MARNSQPKNI SDIDNKDVAL KNATEQINKK FGKGAIMKLG EDAEKLEVGV IPTGALSLDA 
ALGIGGVPRG RIIEVYGPEA SGKTTLALQI LAEAQAAGGI AAFIDAEHAL DPTYAARLGV
DIDELLIAQP STGEEALEVC DMLVRSNAID CIVIDSVAAL VPRAEIEGEI GDASVGLQAR
LMSQALRKLA GSLSKSNTTC IFINQLREKI GVMFGNPETT TGGRALKFFA SVRIDVRRIE
TLKNKSNEPC GNRVRAKVVK NKVAPPFRQA EFDLMYGTGI SREGCILDMG VEADVVTKSG
SWYTYGEERL GQGRDAAKEM LRTNPDLRDE IEAKVREYFD IPMPGQSVTV DVAEENAGGL
E