| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09660 |
|---|
| Symbol | |
|---|
| ID | 8394857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1108357 |
|---|
| End bp | 1109028 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644985725 |
|---|
| Product | cytidylate kinase |
|---|
| Protein accession | YP_003143353 |
|---|
| Protein GI | 257063681 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0283] Cytidylate kinase |
|---|
| TIGRFAM ID | [TIGR00017] cytidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCG CAATCGACGG CCCCTCCGGA GCCGGTAAAT CCACGGTGGC CACGGCTGTG
GCCAGGCGAC TCGGTTTCCA TTGCCTGGAC ACCGGCGCCA TGTACCGCTC CATCGCCTGG
AAGGCCATCC AGCAGGGCGC CGACCTGGCC GACGAGGCTG CGGTGGGCGC CATCGCCCAG
ACCTTCGACA TCGCCTTCGA GCATGAAGAA GGCGACCCCA GGCCCAGCCG CGTGCTCATC
GGGGGCGACG ACGTGACCGC CGCCATCCGC ACGGCCGAAA TCGACCGTTC GGTCAGTGTG
GTGAGCGCCC ATCCCAGCGT GCGCGCCGCC CTGGTCGAGC AGCAGCGCCG CATCGCCGAG
GGAGGCGACT ACGTCATCGA GGGCCGCGAC ATCGGCACGG TGGTGTGCCC GAACGCCGAG
GTCAAGGTGT TCCTGACGGC AACCAACGAA GCTCGCGCCC GCCGTCGCGT GGCCCAGAAC
GCCGAGCGCG GCGTGGGCTC TGTGGACTTC GAAGAGGTAC TGGCCGACAT CATCCGCCGC
GACGAGCTGG ATTCGAGCCG CGCCACGGCT CCGCTGGTCC AGGCCGACGA CGCCGTGCTG
GTGGATTCCT CGGACAAGAC CATCAACGAG GTCATCGACG CGATCTGCGC CATGGCCGAT
GCCCGGGCGT AA
|
|---|
| Protein sequence | MIIAIDGPSG AGKSTVATAV ARRLGFHCLD TGAMYRSIAW KAIQQGADLA DEAAVGAIAQ
TFDIAFEHEE GDPRPSRVLI GGDDVTAAIR TAEIDRSVSV VSAHPSVRAA LVEQQRRIAE
GGDYVIEGRD IGTVVCPNAE VKVFLTATNE ARARRRVAQN AERGVGSVDF EEVLADIIRR
DELDSSRATA PLVQADDAVL VDSSDKTINE VIDAICAMAD ARA
|
|---|
| |