Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04810 |
Symbol | |
ID | 8394373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 567129 |
End bp | 567968 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985244 |
Product | predicted glutamine amidotransferase |
Protein accession | YP_003142890 |
Protein GI | 257063218 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00756632 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGAAG TTCATGATCG TCCGATTATA GGCATCGTTC CGACGCAGGA TTTGGCTGCA GGACGCATCG AAATCCGCGA CGAGTATCTG GATGCAATCG TCATGGCCGG CGGCACGCCT CTGGTGTTGC CGCTGACCGA GGACACCGGC GTATACGAAA CGCTGTTTCC GCTGGTGGAC GGGTTTGTTC TCAGCGGCGG GCACGACATC GACCCCGCTC GCTACGGCGG CGACGCCTCA AACGACAAGC TGGGCGAGCT CACCCCCATG CGCGATGCGG TGGAATACCT GGTGCTGAGC TACGCCTATA AATACGACGT GCCAACGCTG GGCATCTGCC GCGGCATGCA GATGATGAAC GTGTTCTTCG GCGGTACGCT CTACATAGAT CTTGCCGATC AGTTCGACGG GCCCCAAGGC ATTACCCAGG ACATGCTGAA GCACCAGCAG ACCATCGATT ACAGCGAACC GTCCCATTTT GTCGACATCG TCCAGTCATC CAAGTTGGGA AACCTGCTGC AAACCGGTCG TATCACAACA AACTCCATGC ACCACCAGGG CGTTTGCGTT TTGGCGCCGC TGCTGAACCC CGTCGCGTTC GGTCCTGACG GGCTGGTGGA AGCCATCGAG GTGAAAGATC GTTCCTTCAT GATGGGCGTG CAGTGGCATC CGGAGTTCTT CGCCGGCGCC AAAAAGATGG GCTGCATTTT CGCGTCGTTG GTGGACGAGG CGGGTCTGAG CGCCATCCGC CAGCAAAACG GTCGCAAGCC GCTGCCCATC GTACCGCCGG AGGCCCGCGC GGGCGCATGG CCTGAAGTCG GACGCAGGTC CGAAGGCTAG
|
Protein sequence | MGEVHDRPII GIVPTQDLAA GRIEIRDEYL DAIVMAGGTP LVLPLTEDTG VYETLFPLVD GFVLSGGHDI DPARYGGDAS NDKLGELTPM RDAVEYLVLS YAYKYDVPTL GICRGMQMMN VFFGGTLYID LADQFDGPQG ITQDMLKHQQ TIDYSEPSHF VDIVQSSKLG NLLQTGRITT NSMHHQGVCV LAPLLNPVAF GPDGLVEAIE VKDRSFMMGV QWHPEFFAGA KKMGCIFASL VDEAGLSAIR QQNGRKPLPI VPPEARAGAW PEVGRRSEG
|
| |