Gene Shel_04780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04780 
Symbol 
ID8394370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp565143 
End bp565499 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content52% 
IMG OID644985241 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003142887 
Protein GI257063215 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000795596 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.576293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGTG TCACGGTGAA GATTGCTGAA GTCAGCAAAA AATACGGTCT TTCGGCGGAC 
ACGCTTCGAT ATTACGAACG TGCGGGGCTG TTAGGCCAGG TGACCAGAAC GAAGAGCGGT
ATTCGCAATT ACAGCGACGA GGATTGCGAA CGCATCGAGT TCGTCATGAC CATGCGAAAC
GCCGGAATTC CCGTCGAAAT GCTTGCTGAA TACGTCAGCT TGTTCGAACG TGGGGAAGAG
GGCGCGATCC TGCGCAAGGC CGTTTTGCAG CAGCAACGCG AAATCGTTTC CAAACGAATC
ACGGAACTTA ACGAAACACT CAAATGGATT GACGACGAAA TCGAAAGCTG CGCATAG
 
Protein sequence
MRGVTVKIAE VSKKYGLSAD TLRYYERAGL LGQVTRTKSG IRNYSDEDCE RIEFVMTMRN 
AGIPVEMLAE YVSLFERGEE GAILRKAVLQ QQREIVSKRI TELNETLKWI DDEIESCA