| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_01950 |
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| Symbol | |
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| ID | 8394087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 241152 |
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| End bp | 242702 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644984967 |
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| Product | cell envelope-related function transcriptional attenuator common domain protein |
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| Protein accession | YP_003142614 |
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| Protein GI | 257062942 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000132864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGG CTGCCCAGCC CACCATGGTG TTCGACCAGC CGGCGGTTGC GGGTTCGGTC
AGCCCTGTGG CCTACAGCAA GACGGGCAGC AAGCGCAAGG AGCGCAACGC TTCCAAAAAG
GCCGCGCAAG TCGCTCAGAG CAGCAACCCG TACGTCGCCA GCGCGTACAA GACCAAGAAG
AAGGCCCCCT TGGCGCTGAA GATTCTCGGC GCTGCGGTGC TGGTGTTGGC CCTCATCGGC
GGCGGCCTGG CGGCATTCGC CTACATGTAC GCCAGCAACA TCGACAAGAA CCTGAGCGAA
GGCATCGACC AGTCCACCCT GGACATCTTG GGCGAGAACC AGATCGCGCC CGGCGATCCG
TTCTACATGC TCATCGTGGG TACGGACGGG TCTGAGGCCC GCAAGGAGAC CTACGGCGAT
ACCTTCCGCT CCGACTCCAT GATTCTCGCG CGCATCGATC CTGTCCAGAA GAAGGTCACC
CTCATTTCGC TCGAGCGTGA CACATACGTG AACATCGAGG GGTACGGCCC CAACAAGCTC
AACGCGTCCG CCGCGTACGG AGGCGCGCCG CTGGTCATCT CCACGGTTCA GGAACTGGCC
GGCGTGCCCA TCAGCCACTA CGCGCAGGTC GACTTCGACG GTTTTGAATC GGCCATCGAT
GCCCTGGGCG GTGTGGAAGT GGACGTGCCC ATCGACATCG ACGACGACCG TGCCGGCGGC
CAACTGAGTG CAGGCCTTCA AACGCTTAAC GGCGAGCAGG CCCTGATCCT GTGCCGCTCG
CGCCACGCGT ACGACGCGTA CGGTTCGGGC GACTACTACC GCATGGCCAA CCAGCGCCTG
GTGCTCGGCG CCATGGTTAA GAAAGTTCTG GCATCCGACG CCGTCACGCA GGCGGAAGTG
GTCAACGCCA TGTCTAAGTA CATCACCACT GACCTTTCGG TCCAGGACGT TTTGGACCTT
GCGGCCATGT TTAAGGGCAT GGACACGTCC ACTGACATCT ATTCGGCCAT GACACCCACC
ACCAGCGCGT ACATCAACGG CACGTGGTAC GAGTATCTTA ACGTTGAGGA ATGGCAGAAG
ATGATGGCCC GCGTGGATGC CGGCCTGCCG CCCTACGAGG ACGACGCCCA GAATCTCAAC
GAGGGCGGTG TTATCGACCA GAACAAGGCC TACCTGGGCA AAGACCCGAA CATGGCTGTG
GATACCTCCG GGGCGCAGAC CACCACCACG ACGCCGACTC CGGAAACCGA GCAGACCTAC
GACAGCAGCT ACTACAGCGG AACCGACAGC GGCTACTACT ACGAGGATCC CAACACCTAC
TACGAGGACC CCAACACCTA TTATGAGGAT CCGAACGCCT ATTACGAAGA CCCCAGCTAC
TACGAGACGC CCGAAGAGCC CCCGGCTGAG GTTGATACCG GCGGCGGCGA GTACGTTGAT
CCGGGCCCGG TCGATTCGGG CGGCACGGGC GGTACCGGCG GCGGGGATGT GCCCGTGGAA
GACGGCGGCG ACACCGGTGG TGGAGAAGCA CTGACCGAAG GCGGCCAATA G
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| Protein sequence | MPQAAQPTMV FDQPAVAGSV SPVAYSKTGS KRKERNASKK AAQVAQSSNP YVASAYKTKK
KAPLALKILG AAVLVLALIG GGLAAFAYMY ASNIDKNLSE GIDQSTLDIL GENQIAPGDP
FYMLIVGTDG SEARKETYGD TFRSDSMILA RIDPVQKKVT LISLERDTYV NIEGYGPNKL
NASAAYGGAP LVISTVQELA GVPISHYAQV DFDGFESAID ALGGVEVDVP IDIDDDRAGG
QLSAGLQTLN GEQALILCRS RHAYDAYGSG DYYRMANQRL VLGAMVKKVL ASDAVTQAEV
VNAMSKYITT DLSVQDVLDL AAMFKGMDTS TDIYSAMTPT TSAYINGTWY EYLNVEEWQK
MMARVDAGLP PYEDDAQNLN EGGVIDQNKA YLGKDPNMAV DTSGAQTTTT TPTPETEQTY
DSSYYSGTDS GYYYEDPNTY YEDPNTYYED PNAYYEDPSY YETPEEPPAE VDTGGGEYVD
PGPVDSGGTG GTGGGDVPVE DGGDTGGGEA LTEGGQ
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