Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00750 |
Symbol | |
ID | 8393967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 101203 |
End bp | 101796 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644984848 |
Product | transcriptional regulator |
Protein accession | YP_003142498 |
Protein GI | 257062826 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.935342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACG GAAAACAGAA CATACGCGCG GCGCTGCTGG AAAGCGGCAA GAAGGAGTTT CTCGAACACG GCTTCGACAA AGCTTCGCTG CGCACCATCT GCCAAAACGC CGGCGTGACC ACTGGGGCCT TCTACTCCCA TTTCGAAAAG AAGGAAGACC TGTTCTCGGC CTTGGTCGAA GACGATTTGC GGCTGTACAA CCAGATGTAC GACGGGCTTA TGGACCGGAT CATCGATCAG AAATCGACGC AACTCGACAG CGAAGCCCTG CTCATGTCCT TCATCATGGA CCACCGCGAC CTGTTCAAGC TGCTGTTCGA CTGCGCCCAA GGCACCAAGT ACGAAAACTT CAAGGCCGAC CTCCTGGTCA AGTTCAACGA CACTTACCAG GACTTTTTCG ACGCCTACAA CCCTGGCGCG GTGGACCCCG CCGTCACGAA CACCATCCTG CGCATGAAAT TCGAGCAGTA CTGCGCCATG ATCTATAGCG ATTACAGCCG CGACGAAGTG ATGCGCATAA CACGACGAAT ACGAGACTTC ACCCGAGCAG GGTTTGAAGC ACTCCTCAAC ACGTCTTTCG AAGGCCCGGG ATAA
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Protein sequence | MKNGKQNIRA ALLESGKKEF LEHGFDKASL RTICQNAGVT TGAFYSHFEK KEDLFSALVE DDLRLYNQMY DGLMDRIIDQ KSTQLDSEAL LMSFIMDHRD LFKLLFDCAQ GTKYENFKAD LLVKFNDTYQ DFFDAYNPGA VDPAVTNTIL RMKFEQYCAM IYSDYSRDEV MRITRRIRDF TRAGFEALLN TSFEGPG
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