Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2129 |
Symbol | |
ID | 8368590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2547486 |
End bp | 2548850 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644984583 |
Product | DNA repair protein RadA |
Protein accession | YP_003142234 |
Protein GI | 256820955 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.124782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAAAC TAAAAACAGC ATATTTCTGT CAGAATTGCG GAGCACAATA CAGCAAATGG CAAGGACAGT GTTACGTCTG CAAGCAGTGG AATACCATTG TGGAAGAAGT CGTACAGAAA GACACTGCTC CTGCTTGGCA AGAGAAAGAA TCACCTATCA AGAGTAAAGC TCCTAAGTAT ATCTCTATTT CGCAAATCGA TACACAACAG GAGGCGCGCC TCAATAGCAA CAACCACGAA TTGAATAACG TTTTGGGTGG TGGAATTGTA CCGGGGTCGG TTACTCTTTT AGGGGGTGAA CCTGGCATTG GCAAGAGTAC GCTACTGCTA CAAATAGCTC TTAACTTGCC TTATCGTACC CTCTACGTAT CGGGGGAGGA AAGTGAGAAA CAGATAAAAA TGCGCGCTGA CCGCATTCCG CATAAGCTCG ATAATTGCTT TATCCTCACT GAAACTAAGA CGCAAAATAT CTTTCAGCAG ATAAAAGAAC TCTTGCCCGA AATCGTGATT ATCGACTCTA TCCAAACCCT TCAATCTGAT TATATAGAGG CATCAGCAGG GAGTATTTCT CAAATTAGGG AATGTGCCTC CGAACTGATT AAGTTTGCTA AAACTACTCA CACTCCTGTA ATACTCATTG GGCATATCAC TAAGGACGGA CAAATAGCAG GACCTAAGAT ATTAGAGCAT ATGGTCGATA CGGTTTTGCA GTTTGAAGGC GACCGTAATC ACGTGTACCG TATCTTGCGT TCACTGAAAA ACCGCTTTGG CTCTACTTCC GAACTAGGTA TTTACGAGAT GCTTAGCAAC GGATTGCGTG AGGTAAATAA TCCTTCGGAG ATTCTCATTT CCAAAACCGA TGAGACGATT AGCGGTACCT CCATAGCTGC CACTTTGGAA GGTATGCGTC CGCTGATGAT TGAAATACAA GCACTCGTAA GTACAGCGGT ATATGGAACA CCACAACGCA GTACTACGGG CTTCAATGCC AAACGCCTCA ATATGCTTTT GGCAGTGCTT GAGAAACGCG CAGGATTCCG CTTAGGAGCT AAGGACGTCT TCCTTAATAT TACCGGAGGC ATTACTATCG ACGACCCCGC CACTGACTTA GGAGTGGCGA TGGCTATCCT ATCTTCTAAC GAAGATATAG CAATTGAAAA GGACGTCTGT TTTGCCGGCG AAGTAGGATT AGGCGGTGAA ATACGCCCTG TACAACGCGT AGAGCAACGC ATTACAGAAG CTGAGAAATT AGGCTTCAAC ACTATTTTTG TATCAAAATA TAACAAAATA GCCCTTAAAA ATACTAAAAT TAGGATTGTA AAAGTTGCCA AGATAGAAGA TGCAATACAA GAACTATTTG GATAA
|
Protein sequence | MAKLKTAYFC QNCGAQYSKW QGQCYVCKQW NTIVEEVVQK DTAPAWQEKE SPIKSKAPKY ISISQIDTQQ EARLNSNNHE LNNVLGGGIV PGSVTLLGGE PGIGKSTLLL QIALNLPYRT LYVSGEESEK QIKMRADRIP HKLDNCFILT ETKTQNIFQQ IKELLPEIVI IDSIQTLQSD YIEASAGSIS QIRECASELI KFAKTTHTPV ILIGHITKDG QIAGPKILEH MVDTVLQFEG DRNHVYRILR SLKNRFGSTS ELGIYEMLSN GLREVNNPSE ILISKTDETI SGTSIAATLE GMRPLMIEIQ ALVSTAVYGT PQRSTTGFNA KRLNMLLAVL EKRAGFRLGA KDVFLNITGG ITIDDPATDL GVAMAILSSN EDIAIEKDVC FAGEVGLGGE IRPVQRVEQR ITEAEKLGFN TIFVSKYNKI ALKNTKIRIV KVAKIEDAIQ ELFG
|
| |