| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2014 |
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| Symbol | |
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| ID | 8368475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2404358 |
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| End bp | 2405986 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644984468 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003142119 |
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| Protein GI | 256820840 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.534696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA ACTTAGCTTA CACCTACGGA GCTTCCAATA TCTCTCTTAT AGGGGAGACT
ATCGACCAAA ACCTTCGTAA AACAGTGGAA AAATACCCTA ATAAGGAAGC GCTTATATCT
GTACACCAGG ACTACCGAGT TACTTACGCC GAGTTTTATG CACAAGTAAC GGCTGTAGCC
AAAGGGCTTA TCGCCTTAGG TGTGAAACAA GGCGATAGGG TAGGTATTTG GTCGCCTAAT
TGCTATGAGT GGACGCTCTT GCAGTATGCT ACCGCCAAAA TAGGAGCGAT AATGGTGAAT
ATCAATCCTG CTTACCGCAC CAGTGAGTTG ATTTATGTAA TCAATCAATC AGGGATATCA
TACATCTTTG CTGCCCCTCA GTTTAAAAGT AGTAATTATA AAAAGATGAT AGACGATGCG
CGTGAGTTCA CTGAAACTTT GCGTAAAGAA GTGTATTGGG GAGAGAGCTG GCAACATTTC
TTAGCACACG GTGAAAAAGT CACTGACGAG AAACTACTTT CTTTTGAAGA GAGAGTGCAG
TTTGATGACC CAGTAAATAT ACAATATACT TCAGGAACTA CGGGCAACCC CAAAGGTGTT
ACACTTTCTC ACCACAATAT CCTCAATAAC GGTTATTTTA TAGGTATCCG AATGAATTAT
ACTGAAAAAG ATAGAGTGTG TATTCCTGTA CCTTTTTACC ACTGTTTCGG AATGGTAATC
GGCAATATCG CCTGCACAAC ACACGGTGCT ACTATGGTAA TCCCTAATGA TAGTTTCGAT
GCTACTAAAA CACTCGAAGC TGTAGAGAAA GAAAAATGTA CTTCGCTTTA TGGTGTGCCT
ACGATGTTCA TCTCAGAACT GTATGTATTA GACAAACAAC CTTATGATTT ATCAAGTTTG
CGTACAGGAG TAATGGCAGG TGCTTTGTGT CCTCCTGAAA TTATGAAACG TGTAAAAGAG
CAAATGAATA TGCACGAAAT AACCATTTGC TACGGTATGA CAGAAACTTC GCCCGTCTCT
ACACAAACTA AAATAGGAGC ACCTTTCGAG AAACAAATCT ACTCGGTAGG AACTATTCAC
GACCACTTAG AGATTAAGAT TATCAATCCT GAGACCAAAG CCATCGTCAA ACGAGGTGAG
AACGGTGAGC TATGTACTCG TGGCTATTCA GTAATGTTGA AGTATTGGAA CAGTCCGCAG
GCTACACAGC AGGTGATAGA CGAACAACGC TGGATGCACT CTGGCGATTT GGCTATGATG
GACGAGGATG GCTATATTCA TATCTCAGGT CGCATTAAAG ATTTGATTAT TCGCGGAGGT
GAGAATATCT CTCCTAAAGA AATAGAAGAC TTCCTCTATA CCTATAAAGG AGTAATGGAC
GCGCAAGTAA TTGGTGTCCC TAGCAAAAAA TACGGCGAAG AAGTTATGGC TTGGATTAAA
CCTAAAGAAG GGGTTACCCT CACTGAAGAA GAACTCCACG ACTTCTGCAA AGGGCGTATT
GCTCATTACA AAGTGCCTCG TTATTGGAAG TTTGTAGAAG AGTTCCCGAT GACTATCTCG
GGTAAAATAC GCAAGGTAGA AATGCGTGAA ATATCAGCCA GAGAACTCGG TTTAGAGGAC
GAAGATTAA
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| Protein sequence | MNKNLAYTYG ASNISLIGET IDQNLRKTVE KYPNKEALIS VHQDYRVTYA EFYAQVTAVA
KGLIALGVKQ GDRVGIWSPN CYEWTLLQYA TAKIGAIMVN INPAYRTSEL IYVINQSGIS
YIFAAPQFKS SNYKKMIDDA REFTETLRKE VYWGESWQHF LAHGEKVTDE KLLSFEERVQ
FDDPVNIQYT SGTTGNPKGV TLSHHNILNN GYFIGIRMNY TEKDRVCIPV PFYHCFGMVI
GNIACTTHGA TMVIPNDSFD ATKTLEAVEK EKCTSLYGVP TMFISELYVL DKQPYDLSSL
RTGVMAGALC PPEIMKRVKE QMNMHEITIC YGMTETSPVS TQTKIGAPFE KQIYSVGTIH
DHLEIKIINP ETKAIVKRGE NGELCTRGYS VMLKYWNSPQ ATQQVIDEQR WMHSGDLAMM
DEDGYIHISG RIKDLIIRGG ENISPKEIED FLYTYKGVMD AQVIGVPSKK YGEEVMAWIK
PKEGVTLTEE ELHDFCKGRI AHYKVPRYWK FVEEFPMTIS GKIRKVEMRE ISARELGLED
ED
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