| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1970 |
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| Symbol | |
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| ID | 8368428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2362955 |
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| End bp | 2363773 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644984421 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_003142075 |
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| Protein GI | 256820796 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0476362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACTA AGCAACTCAT ACAGCAAATC GAAGCTAAAC AATCGCTGTT ATGTGTGGGC
TTGGATACCG ATATGGCTAA AATTCCTCCT CACTTGCTTG AAGAGGAAGA CCCGCTGTTC
GCGTTCAACA AGGCGATTAT AGAGGCTACC CACGCTTTTG CGGTAGCCTA CAAACCCAAT
ACAGCTTTCT ACGAAGCACA CGGCGAAAAA GGTTGGCGCG CCTTAAAAAA GACGATTGAT
TATCTGAACT GTCACCACCC TGAGATTTTC ACTATTGCCG ATGCCAAACG CGGGGATATA
GGCAACACTT CAAGTATGTA TGCCAAAGCT TTTTTTGAAG ATATGCAATT CGATAGCGTG
ACAGTAGCCC CCTATATGGG AAGGGATTCG GTAGAGCCTT TTTTAGCTTT TGAGAACAAA
CAAACCATTC TCTTAGCACT AACTTCTAAT GAAGGAGCTT TTGACTTCCA AACGCAAAAA
CTCAACGATG AAGAGCTGTA CAAAAAGGTA TTACGTACCT CACTCACTTG GCAAAACAGC
CAAAACCTGA TGTACGTAGT AGGCGCAACC AAGGCGGAAT ACCTAAAGGA AATACGTAAA
ATTATACCTA AACATTTCTT GTTAGTACCA GGAGTAGGTG CTCAGGGAGG TAGCTTGGAA
GAGGTATGTA AGTATGGTTT GAACGACCAC TACGGACTGC TTATCAACTC GTCAAGAGGC
ATTATTTACG CTTCTAAGGG CGAAGACTTT GCCAAAGTAG CAGGTGAAAA AGCTGAGGAA
TTACAACAGA AGATGAAATT AATGCTTAAT GGTAAATGA
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| Protein sequence | MTTKQLIQQI EAKQSLLCVG LDTDMAKIPP HLLEEEDPLF AFNKAIIEAT HAFAVAYKPN
TAFYEAHGEK GWRALKKTID YLNCHHPEIF TIADAKRGDI GNTSSMYAKA FFEDMQFDSV
TVAPYMGRDS VEPFLAFENK QTILLALTSN EGAFDFQTQK LNDEELYKKV LRTSLTWQNS
QNLMYVVGAT KAEYLKEIRK IIPKHFLLVP GVGAQGGSLE EVCKYGLNDH YGLLINSSRG
IIYASKGEDF AKVAGEKAEE LQQKMKLMLN GK
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