| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1654 |
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| Symbol | |
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| ID | 8368100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1978916 |
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| End bp | 1980874 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984094 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_003141760 |
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| Protein GI | 256820481 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGACA ATAAAAGCAA CGGGTCTCGT TTTTCAGCCT ATTGGTTATA TGCCATATTA
CTGCTGATAC TTATAGGTTT TAATTATTAT TCAGGAGCCA GTTTTTGGTC ACAGCCCAAA
GAGATTCCGC AATCTAAATT TGAGGAATAC CTTAGTAATG GCGATGTGTC TAAAATCATC
ATCTTAAACC GTAAAGAAGC TAATGTATAT CTCACCCCCG ATGCTCTTAA AAAAGAAGAG
CACAAAGAGG TAAAACCTAC GGGAAATACG TTTATGCAGG GTGCTAACGC AGGTGAAGTT
CCCCAATACC GTTTTGAATT AGGTGATTTG AGTAATTTCG AAAACCGATT CGACCAAATT
GTAAAAGATA ACAACCTCAG CACTACTCGT GAGAACAAAA CCGAGCAAAA CATCTTCGGC
GATTTACTGT TCTCTATTTT GCCTTTTATA GTTATCATAG GCTTGTGGAT TTACATAATG
CGCCGTATGG CAGGAGGCGG AGGAGCTGGT GGTATCTTCA GCATTGGCAA ATCTAAAGCG
CGCGTATTCG ATGAAAAGAA AGAAACGCGT GTAACTTTTC AAGATGTAGC AGGCTTAGAG
GGAGCAAAAG AAGAAGTACA AGAGATTGTA GACTTCCTCA AAAACCCCGA TAAATATACT
TCATTAGGAG GTAAAATACC GCGTGGAGCC CTATTAGTAG GTCCTCCTGG TACAGGTAAA
ACTCTTCTTG CGAAAGCTGT AGCAGGTGAA GCACAAGTAC CTTTCTTCTC ACTCTCTGGT
TCTGACTTTG TAGAGATGTT CGTAGGGGTA GGTGCCTCTC GTGTGCGCGA CCTTTTCAAG
CAAGCTAAAG AAAAGTCTCC TTGTATTATC TTTATTGATG AAATTGATGC TATAGGTCGT
GCTCGTGGTA AAAATGTAAT GACGGGAGCT AATGATGAGC GTGAGAATAC TCTCAATCAA
CTCCTTACCG AGATGGACGG TTTTGGTTCA CATACTAATG TTATCGTATT GGCAGCTACT
AACCGCGCTG ATATCCTAGA TAAAGCACTA ATGCGCGCAG GACGTTTCGA CCGTCAGATT
TATGTGGAGC TTCCTAACTT AAATGAGCGC AAACAGATAT TTGAAGTACA TTTGCGACCT
ATCAAAACAG CAGAAACATT AGATATAGAC TTCTTAGCAA AACAGACCCC AGGATTCTCT
GGCGCTGATA TTGCTAATGT ATGTAATGAA GCAGCCCTTA TTGCAGCACG CAAAGGTAAA
ACAGCTGTAA GCAAACAAGA ATTCCTTGAT GCAGTGGATA GAATTGTAGG TGGTTTGGAG
AAGAAAACTA AAATCCTTAC TCCCGAAGAA CGCAAGACAA TAGCCTTCCA CGAAGCAGGT
CACGCTACTG TAAGTTGGCT CTTAGAGCAC GCCGCACCAC TTGTAAAAGT AACTATCGTG
CCTCGCGGAC AGTCGTTAGG CGCGGCTTGG TATTTGCCAG AAGAACGCCA AATAGTGCGT
ACTGAACAGA TACTCGATGA GATGTGCGCT GCCCTTGGCG GTAGAGCTGC AGAAAAAGTG
ATATTCGATA AGATTTCTAC AGGTGCTCTC AGCGACCTTG AGAAGGTAAC CAAACAAGCG
CGTGCAATGG TAACAATTTA TGGGCTTAAT GACAAGATAG GTAACCTTAC TTATTACGAT
TCAGCCCAGT CCGATTATAG TTTTACCAAA CCTTATAGTG AGAAAACAGC GCACCTAATA
GATGAAGAGA TTTCTAAGAT TATAGAAGAA CAATATCAGC GTGCTATTGA TATTCTCACC
GAGAATAAGG ATAAGCTTAC TACTTTGGCA AACTTGCTCT TAGAACGTGA AGTAATCTTC
CGCGAAGATC TTGAAAATAT CTTTGGTAAG CGCAAGTTTA AAGACCCACA CGATATTATT
GAGGAGGAAG AAGATAAATC CTCAGAAGTT GTATCGTAA
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| Protein sequence | MSDNKSNGSR FSAYWLYAIL LLILIGFNYY SGASFWSQPK EIPQSKFEEY LSNGDVSKII
ILNRKEANVY LTPDALKKEE HKEVKPTGNT FMQGANAGEV PQYRFELGDL SNFENRFDQI
VKDNNLSTTR ENKTEQNIFG DLLFSILPFI VIIGLWIYIM RRMAGGGGAG GIFSIGKSKA
RVFDEKKETR VTFQDVAGLE GAKEEVQEIV DFLKNPDKYT SLGGKIPRGA LLVGPPGTGK
TLLAKAVAGE AQVPFFSLSG SDFVEMFVGV GASRVRDLFK QAKEKSPCII FIDEIDAIGR
ARGKNVMTGA NDERENTLNQ LLTEMDGFGS HTNVIVLAAT NRADILDKAL MRAGRFDRQI
YVELPNLNER KQIFEVHLRP IKTAETLDID FLAKQTPGFS GADIANVCNE AALIAARKGK
TAVSKQEFLD AVDRIVGGLE KKTKILTPEE RKTIAFHEAG HATVSWLLEH AAPLVKVTIV
PRGQSLGAAW YLPEERQIVR TEQILDEMCA ALGGRAAEKV IFDKISTGAL SDLEKVTKQA
RAMVTIYGLN DKIGNLTYYD SAQSDYSFTK PYSEKTAHLI DEEISKIIEE QYQRAIDILT
ENKDKLTTLA NLLLEREVIF REDLENIFGK RKFKDPHDII EEEEDKSSEV VS
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