Gene Coch_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1378 
Symbol 
ID8367809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1617843 
End bp1618445 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content41% 
IMG OID644983805 
Productputative PAS/PAC sensor protein 
Protein accessionYP_003141485 
Protein GI256820206 
COG category 
COG ID 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA CTCCAACAAT CAAACGTCCC GTGCCCATAG ACGAAGAAGT GTTGTGGGAT 
AAAACCACTA CCCTGATGAG TCGTACCAAC AAGCACGGAC ATATAATGGA AACCAATAAG 
GCATTTCAAG AAGTATCAGG CTATACTGAG GCTGAGTTAT ACGACCAGCC TCATAGCCTT 
ATCCGCCACC CCGATATGCC CAAAGTAGTT TTCAAAATAC TGTGGGAAAA CCTCAAAGGG 
CATAATAATT TCCACGCTAT CATCAAGAAC CTCTCTAAAA GCGGGCGCTA TTATTGGGTG 
ATTACTAATT TTGAAATAGT ACGCAATGAG CAAGATGAGA TTACTGCTTT TGTATCACAC 
CGCAAAGCTT TGCCTAAAGT ACTCATTAGC GAGCATATAG TCCCTTTGTA CGAACGTCTT 
TTAAAGATAG AAAAAGCCAA TGGTTTGGAA GTAAGTGAAC GCTATTTCAA CGGCTTTTTA 
GAAGACCGTA AAACTACCTA CGATGCTTTC ATTCGCCAAT TGCTCAAAGA AAACGCCGAA 
GAAATCAAAG CCTTCTATAA CAACAAAAAC ACCGATAGCT TTTTAACAGA ACTCATTCGA 
TGA
 
Protein sequence
MTETPTIKRP VPIDEEVLWD KTTTLMSRTN KHGHIMETNK AFQEVSGYTE AELYDQPHSL 
IRHPDMPKVV FKILWENLKG HNNFHAIIKN LSKSGRYYWV ITNFEIVRNE QDEITAFVSH 
RKALPKVLIS EHIVPLYERL LKIEKANGLE VSERYFNGFL EDRKTTYDAF IRQLLKENAE 
EIKAFYNNKN TDSFLTELIR