Gene Coch_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1165 
Symbol 
ID8367587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1379489 
End bp1379671 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content35% 
IMG OID644983591 
Productribosomal protein L30 
Protein accessionYP_003141279 
Protein GI256820000 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0238575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAC TTAGAGTAAC ACAAATTAAA AGTAGCATCA AACGTCCAAA AGACCAAAAA 
CTTACCCTCG AGGCTTTAGG ACTTACTAAA ATCGGTAGAA CCGTGGAACA CGAAGCTACA
CCAAGTATCC TTGGTATGAT AAATAAGGTA AAACACTTAA TTTCTGTAGA AGAAGTTAAA
TAA
 
Protein sequence
MAKLRVTQIK SSIKRPKDQK LTLEALGLTK IGRTVEHEAT PSILGMINKV KHLISVEEVK