Gene Coch_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0879 
Symbol 
ID8367298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1035171 
End bp1035944 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content38% 
IMG OID644983304 
Productphage antirepressor protein 
Protein accessionYP_003140995 
Protein GI256819716 
COG category[S] Function unknown 
COG ID[COG3645] Uncharacterized phage-encoded protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00137369 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGAAA TAACAAACAC AAACTATCAG CCTATGCAAG AGTTGATTAA AATCACCGAA 
AAAAATGGCA ATAAAGCAGT ATCAGCAAGA GAATTACACA AATTCTTAGA AATTACTGAA
AGATTTAGTA ATTGGTTTGA AAGAATGTTG CAGTATGGGT TTGTTGAAAA CCACGATTTT
ACAAGTGTTA AAAGTTTTAC GCTTGTGAAT AATGGTGCGC AAAGAGAGTT AGAAGACTAC
GCCCTCACTC TTGATTGTGC AAAAGAGATT TCAATGCTAC AACGCTCTGA AAGGGGCAAA
ATGGCACGCC AATATTTTAT TGAGTGTGAA AAGCAACTAA GAGCAAAAGA ACAAGCACAC
CAACAAATTC CTCAATCATT TTCAGAAGCA TTGCGATTAG CAGCTGAACA AGCCGAGAGG
ATAGAAGCCC AACAAAAGCA ACTGCAAGCG CAAGCGCCTA AGGTATTATT TGCAGACACA
GTAATAGGCT CTCAATCTTC CTGCCTTATT GGTGAACTTG CTAAACTCAT CACTCAAAAA
GGCTATGAGA TAGGAGAAAA GAGGCTTTTC AAGTGGTTAC GAGAAAATCA CTACTTAGGC
ACACGAGGCG AGTACTATAA CATTCCTAAC CAACAATACA TTGAGCAAGG ACTTTTTGAA
TTAAAGAAAG GCACACGCTC AGGAAGCGGC GGGGTAATGC ACACTACTAT TACTCCAAAA
GTAACAGGCA AAGGGCAAGT TTATTTTGTT AATAAGTTCC TTAAAACAAT ATAA
 
Protein sequence
MYEITNTNYQ PMQELIKITE KNGNKAVSAR ELHKFLEITE RFSNWFERML QYGFVENHDF 
TSVKSFTLVN NGAQRELEDY ALTLDCAKEI SMLQRSERGK MARQYFIECE KQLRAKEQAH
QQIPQSFSEA LRLAAEQAER IEAQQKQLQA QAPKVLFADT VIGSQSSCLI GELAKLITQK
GYEIGEKRLF KWLRENHYLG TRGEYYNIPN QQYIEQGLFE LKKGTRSGSG GVMHTTITPK
VTGKGQVYFV NKFLKTI