Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0471 |
Symbol | |
ID | 8366877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 601797 |
End bp | 602429 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644982892 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_003140595 |
Protein GI | 256819316 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACA ACTATATTAT CTTTGATATG GACGGGGTGC TACTGGACAG TGAACCGATG CACCAAGAGA TTATTTATGA GACTTTTCAG CTGAAAGGCA TTCCGTTTGA CAAGGCATAT ATACAAACTC TCACGGGAAT GTCGGCTTTT CCGATGTGGG AAAAGGTAAA ATGCGATGCC CACCGAACAG AAAGTGTAGA GGAGCTAATG CAGTTTCACC GTGATTACTT TTTCAAACGA TTACCCGAAG TGAAAGTTCC CTTAGTACCT CACGTAAAAG AAGTGTTAGA GAAGTTTAAG AATGAAGCAA AGCACTTATC ATTAGCTTCC TCTTCCGGAC GCAAACTCAT CGATATTTTT ACTCAGCAAA CAAATATAGC ACACTATTTT GAAGTAATGA TGAGCGGAGA TGATGTGCAG TACAGCAAAC CTAATCCTGA CATATTCCTA AAAGTAGCCC AATGGTACCA CTTGCCAGCA ACACAATTTA CAGTGATAGA GGACAGTACC AATGGCGTGA AAGCTGCCAA AAGTGCTAAT ATGCAGTGTG TGGGCTTCCA GAATCCCCTT TCAGGCGGAC AAGATTTAAG TCAAGCTGAC CTACTTATCC ATTCAATGCA AGAACTTTTA TGA
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Protein sequence | MTNNYIIFDM DGVLLDSEPM HQEIIYETFQ LKGIPFDKAY IQTLTGMSAF PMWEKVKCDA HRTESVEELM QFHRDYFFKR LPEVKVPLVP HVKEVLEKFK NEAKHLSLAS SSGRKLIDIF TQQTNIAHYF EVMMSGDDVQ YSKPNPDIFL KVAQWYHLPA TQFTVIEDST NGVKAAKSAN MQCVGFQNPL SGGQDLSQAD LLIHSMQELL
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