| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34650 |
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| Symbol | |
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| ID | 8388788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3769759 |
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| End bp | 3770886 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644977486 |
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| Product | glycine oxidase |
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| Protein accession | YP_003135255 |
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| Protein GI | 257057423 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.048332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGAG TCGACCTCGC GGTCGTCGGG GCCGGCGTCA TCGGGCTGGC CGTGGCGTGG
AAGGCGGCCG CGGCAGGGCA TCGTGTCACC GTGTTCGACC CGGAGCCCGC CCGTGGTGGT
GCCTCATGGG TCGCGGGCGG CATGTTGGCC CCCGTCGCCG AGGCGTGGCC CGGCGAGGAG
GCCGCGCTGG CGCTGGGGGA GGAGTCCCTG CGTCGTTGGC CACGTTTCGC CCGCGAACTG
CGGGCGGCGG GATTCGACTG CGGTCTGTCC GAACAGGGCA CGATCATCGC CGCGTTCGAC
CACGCCGACG CCGAGCAGCT CGACATCCTC AGGCAGTACC TCGACGGGAT CGGCAGGCAG
GCCACGTTCG TCACCGGCAG GGGACTCCGT AAGACGGAAC CCGGCCTCGG CGCGGTGCGT
TCCGGGCTGC TCGTGCCGAG TGACGTGTTC GTGGACAACC GCAAACTGTT GGAGGCGTTG
CTGTCGGCGG CGCGTTCGCG GGGCGCGCAG TTCGTCCTCG AGACCGCCGT ACGGCTCACC
GGCGACAGTG TGGCCACGGC CTCACGGACA CGCCGATTCG ACGCGGTGGT GCTCGCCGCG
GGAGCACACA GCGGACGGCT GCATCCGGAA CTGGCGACGG CCGTGCGCCC GCTGAAGGGC
GAGGTGCTGC GCCTGCGCTG CCGCCGGGGC ACGCTGCCCC CTCCTCGACA CACGGTCAGG
GCCGTGTCGG AGGGACGGCC GGTGTACCTG GTTCCGAGGG AGAACGGGGG CCTCGTGCTG
GGCGCCACCC AGTACGAGGC CGGGTTCGAC ACAGCGGTGA CGGCCCGGGG CGTGCGGGAA
TTGATCGAGG CCGCCGAACG GATCTTCCCC GGTGTCGCCG AATACGAGTT GCTCGAGACC
GCGGCGGGAC TCCGTGCGGG CAGTGCCGAC AACATGCCGT ACCTGGGGCC CTTGCGTGAC
GGCGTGTACG CGGCGACGGG TCATCACCGG AACGGACTGT TGCTCGCCCC CGTCACGGCG
GACGCCGTGC TCGCGTGGTT GTCGAACACC CGGCCACCCG ACGGCACGGA ACGTGCGCGA
CCGGACAGGA TCACGAGTGA GGAGCACGTT GATGCGAGTG TTCGTTAA
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| Protein sequence | MSRVDLAVVG AGVIGLAVAW KAAAAGHRVT VFDPEPARGG ASWVAGGMLA PVAEAWPGEE
AALALGEESL RRWPRFAREL RAAGFDCGLS EQGTIIAAFD HADAEQLDIL RQYLDGIGRQ
ATFVTGRGLR KTEPGLGAVR SGLLVPSDVF VDNRKLLEAL LSAARSRGAQ FVLETAVRLT
GDSVATASRT RRFDAVVLAA GAHSGRLHPE LATAVRPLKG EVLRLRCRRG TLPPPRHTVR
AVSEGRPVYL VPRENGGLVL GATQYEAGFD TAVTARGVRE LIEAAERIFP GVAEYELLET
AAGLRAGSAD NMPYLGPLRD GVYAATGHHR NGLLLAPVTA DAVLAWLSNT RPPDGTERAR
PDRITSEEHV DASVR
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