Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_28640 |
Symbol | |
ID | 8388188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3110455 |
End bp | 3111264 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976895 |
Product | dimethyladenosine transferase (rRNA methylation) |
Protein accession | YP_003134672 |
Protein GI | 257056840 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0614661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGGA ACAGGCGGAG CCGCCTCCGC GCCGATCGAC CCAACCCTTC CGGAGTCCAC TTCCTCGTCT CGAAGGACGT ACTCGACACG CTGGTACGCA CGTGTACACC CGGTCCGGAC GATCTCGTCC TCGACCTCGG CGCCGGACCC GGTGTGGTGA CCGCCGCACT GGCCCGCACC CACGCCCGAG TGCTCGCCGT CGAACGCGAT CCCGAGTTCG TGCGCACGCT GAACTCACGC TTCCGCCACA ACGACCGGGT CCGCGTCATC CAAGCGGACA TCCGCACGGT CGCGCTGCCT CGCCGCGATT TCCTCGTCGT GGCGAACCCT CCGTACTCAC TGTCGACACC GCTGCTGCGC CGCTTGCTCG GCGGCCGTAG ACCCAACCTG CGCAGCGCGG CGTTGACCGT GGAGTGGGGA TTCGCCAAAC GCGTCACGAC ACCCGTCCCC GCATCCCGGG AACTCGCGTG GTGGGCAAGC CGATTCGACA TCAGGCTCGT TCGGAAAGTA CCCGCCGACC ACTTTCGACC ACAGCCCACT GTGGACTCCG CCGTGCTCGC CATACGACGG CGACCCCTCA GCCGCACCAC CGAGATCCTG CTCGGCGAGA TCCTCGACGC GGTGGAGCGA TCCCCCTACC GGTCGGCACA CGCCCTCGTT CGGCGTATCG GCCTTGGCGA CGCCCGCCGA CTTCTCAAGC GATGTGACAT CGAACCCGGC AGACGTGCGG CGACCATCAC ACCACGGGAG TGGAGGAGAG TCGCCGAGAC CGTCTCGGCG CGTCTCGGAC GAGGAACCGA CGCGGTATGA
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Protein sequence | MPRNRRSRLR ADRPNPSGVH FLVSKDVLDT LVRTCTPGPD DLVLDLGAGP GVVTAALART HARVLAVERD PEFVRTLNSR FRHNDRVRVI QADIRTVALP RRDFLVVANP PYSLSTPLLR RLLGGRRPNL RSAALTVEWG FAKRVTTPVP ASRELAWWAS RFDIRLVRKV PADHFRPQPT VDSAVLAIRR RPLSRTTEIL LGEILDAVER SPYRSAHALV RRIGLGDARR LLKRCDIEPG RRAATITPRE WRRVAETVSA RLGRGTDAV
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