Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_28380 |
Symbol | |
ID | 8388162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3080551 |
End bp | 3081828 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644976869 |
Product | Zinc carboxypeptidase |
Protein accession | YP_003134646 |
Protein GI | 257056814 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTCGCGT TGCTCGCGAC CGCTTCCCCG GCCATCGCGG AGTCGACCGA CCTCTCCGAG GTACCCGCCT ACTCGACCCA GCTCGATCGT CCTCGGGCAA CGGACGAGGC GTTCGTCTCC GCGGCTCAGG AGTGCAGCGA CGAGCCGCGT GACCTGCCGA TCAACGAGTT CACCGACCAT CGCGAACTCG GCATCGAGCT GGACCGCATC GAGCGGATCA GCGACGGCAA GGTGGACGTC CAGCAGATCG GCATGAGCAA CCGCGGGCGC GAGATCTGGA GCGCGAGGGC GGGGACGGGC CCCAAGGCGG TACTGATCAC CAGCGAGATC CACGGCAACG AGAAGACCGG TACCGACGCC ATACTCGACC TGTTGGACTG GCTGGCCACC AGTGACTCGG CGAAGGCACG GCGGTGGCTT GACGAACTGA CCATCGTCGC GATCCCGAAG ATCAACCCCG ACGGTGCCGA ACTGGACCGG CGCGGCAATG ACATGACGTG GGAGGAGGTG ACGGCTCGGT TCCCGCAGCT GCGGGGGAGC GAGCCCGCCT GGAACTACTA CACCGGCACG CTCCAGGGGG ACGACTATTC GGAGCGGCCC GGGTTCGACG TCAACCGTGA CTATCACCCG GATCTGAACT ACGTGCCGCG TGCCGAGGAC TTCCCCGGTA GTTCCGAGTC CCCCGGGTGG TACATCACAC CGGAGAGTAG GACGGTGCGA GACGTCTACC GTGGGTTGCA GGCCGAATTC GGCAAGGTGG ACGTCTACGT CGACCTGCAC CACCAGGGCG CGTGCTACGT GATGCCGGAC GACCCGGACG AATTCGTCAC CCTGTCGATC TCCGGCAAGT TCGTCGACGA TCCGGCCACC ACGCCGGGAT ACGAGCAGTA CGCCGCGGAC TACGACCTGG ACTACTCCAA ACGGCTCAAC GTCGCGGTCT ACAACGCGCT GCAGGGGGCG GCGAACAACC GACCGTTGTT CGGCAACGTC ACGCTCTACC CTCAGGATCT CCACCTGCCG GGGACCGGGC TCGGGAGTTT CGCGCTCAAC GGAAGCGGCA CGGTGTTGTT CGAGGTGCGC GGACAGACCC AGACGCTCGG CCAGCAGTAT CGCGCGGCGT TGACCAGGGC TGTCTACATC GGACTCGACG GGATGCTCTC CGCGGTGGCC AGCGGCCGGG TGAACCAGCT CGACCCGGCC GACTACGACG CGATCCCGCC GCGTGGTCCG AGTATCGGTA GCGTCATCGA CGACACACGG ACGGTGGCCT CGCACTGA
|
Protein sequence | MFALLATASP AIAESTDLSE VPAYSTQLDR PRATDEAFVS AAQECSDEPR DLPINEFTDH RELGIELDRI ERISDGKVDV QQIGMSNRGR EIWSARAGTG PKAVLITSEI HGNEKTGTDA ILDLLDWLAT SDSAKARRWL DELTIVAIPK INPDGAELDR RGNDMTWEEV TARFPQLRGS EPAWNYYTGT LQGDDYSERP GFDVNRDYHP DLNYVPRAED FPGSSESPGW YITPESRTVR DVYRGLQAEF GKVDVYVDLH HQGACYVMPD DPDEFVTLSI SGKFVDDPAT TPGYEQYAAD YDLDYSKRLN VAVYNALQGA ANNRPLFGNV TLYPQDLHLP GTGLGSFALN GSGTVLFEVR GQTQTLGQQY RAALTRAVYI GLDGMLSAVA SGRVNQLDPA DYDAIPPRGP SIGSVIDDTR TVASH
|
| |