Gene Svir_24850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24850 
Symbol 
ID8387809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2677976 
End bp2678893 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content70% 
IMG OID644976525 
ProductADP-ribose pyrophosphatase 
Protein accessionYP_003134306 
Protein GI257056474 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.203973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCG GTGAAGGTGA GGGGTTCGTC AGCTGCGCGT GTGGACGGAA ACATTGGGGG 
CTGTACGGAG CGGCCGGGCT GTTGCTGGTC GATCCCCGGC GCGGAGTACT GCTGCAACAC
CGGGCGATGT GGACTCATCA CGGCAGCACC TGGGCGTTGC CCGGCGGCGC GGTGTTGCCC
GGCGAGACAC CCGCCGACGC CGCCACACGC GAAACCGAGG AGGAGACCAC CATCCCGCCC
CATGCGGTGC GCGTCCTCGC CTCGTGTGCC GAGGACCACG GCACATGGCG TTACACCACC
GTGCTCGCCA CCGTCCGGGG TGAGGTGGAG GCGCGTGTGG CGAACGGGGA GAGCGTGGCC
CTGCACTGGG TGCCGCTCGA CGAGGTCGAG GAATACCCCC TGCACCAGGA CTTCGCGGCC
GCCTGGCCGC TACTGCGGGA ACAGCTGGAC AGACAACTCG TCCTGGTCGT CGACGCGGCC
AACGTGATCG GTGCCCGCCC GGACGGCTGG TGGCGCGACC GAGCGGGAGC CGTCGCTCGG
CTCCGTGACC GGCTCGCCGC TCTGTCCCGC ATCGGTGTGG CCGCACATCG GGTCGGCCTC
GAGCTGCCAC GGCGGTGGTG TTGGTGGCCG CGCGTGGTCC TGGTGACCGA AGGGAAGGCT
CGCCACGTCG CCGAGGTAGC GGGCGTCGAG GTCGTGTCCG CAACCGGCGA GGGGGACGAC
ACGATCGTCG GAACGGTCGT CGAGCTGCGG TCGGGCCGGC CCCAGGACCA TGTCGTGGTC
GTCACCGCTG ATCGAGAACT GCGCCGTCGG GTGGGTGAAC TCGACTGCGT GTCGTTGGGT
CCCGGTGAGT TGTGGCGACT GCTCGAGGAG TCGGCACAGG CGGCGCGATC GCGGAGTCGA
GGTCGGGTTC AGACCTGA
 
Protein sequence
MLLGEGEGFV SCACGRKHWG LYGAAGLLLV DPRRGVLLQH RAMWTHHGST WALPGGAVLP 
GETPADAATR ETEEETTIPP HAVRVLASCA EDHGTWRYTT VLATVRGEVE ARVANGESVA
LHWVPLDEVE EYPLHQDFAA AWPLLREQLD RQLVLVVDAA NVIGARPDGW WRDRAGAVAR
LRDRLAALSR IGVAAHRVGL ELPRRWCWWP RVVLVTEGKA RHVAEVAGVE VVSATGEGDD
TIVGTVVELR SGRPQDHVVV VTADRELRRR VGELDCVSLG PGELWRLLEE SAQAARSRSR
GRVQT