Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_22660 |
Symbol | |
ID | 8387590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2437027 |
End bp | 2438478 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976319 |
Product | PLP-dependent enzyme, glutamate decarboxylase |
Protein accession | YP_003134101 |
Protein GI | 257056269 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTATCG AGGACGTTCT GGCCCGGGTT CGTGCGTTGC GCGCCGATGA CGCCCCCACC CACGGCGGGC GGACACTCGC CTACGTCTAC GACAGTGGGT TGGCCGAGCT GGACGAGTTG GGGGCACGGG CGCACGCGTT GGCGTCGTCG GCGAACGCGC TCGACCCCAC CACGTTCCCC GGGCTGCTGC GCATGGAGAA CGATCTCGTG GCCACGACCG CGGCGTTGCT CGGCGGTACC GATGAGACGG TCGGGACGGT CACCTCGGGG GGTACCGAGT CGTGCCTGCT GGCCGTGCTC GCGGCCAGAC AAGGCCGTCC GGACGTCGCC GATCCGGCAC TGGTCGTGCC CACCACCGTG CACGCGGCGT TCCGTAAGGC CGCCCACTAC TTCGGACTGC GGCTCGTGGA GGTGGAGGTC GACCCGGTCA CCTTCCGGGC CGACGCCGCC GCGATGGCGT CGGCGATCGA CGACGACACG GTGTTGGTGG TGGCCAGTGC GCCCTCGTAC GCGCACGGGG TGATCGACCC GATCCCCGAG ATCGCGGCCG CGGCCGCCGC GCGGGGGGTT CGGATGCATG TCGACGCCTG CATCGGCGGT TGGGTGCTGC CGTATCTTCG CAGGCTCGGT GTCGACGGAC CCGCGTTCGA CTTCTCGGTC GAGGGGGTCA CGAGCATCTC GGTGGATCTG CACAAATACG CCTACTGCCC CAAAGGCACG TCGGTGTTGT TGTTCGCGAA CGCCGAGGCC CGCCGTGGTC ACTATTTCGG TTGTGCCGAC TGGCCCGGCT ACACGATGTT GAACACCACG TTGCAGTCGA CCCGCTCGGG CGGCCCGCTC GCCGCGGCCT GGGCCGTCGT GACGCACCTG GGCGAGGACG GTTATCTGCG GCTCGCCCGG GAGACGCTCT TCGCCGTGCG GGAGATCAGG CATGGGATCG AGTCGATCGA AGGACTGCGG ATCCTCGGGG AGCCCGATTC CACGTTGTTG GCCGTGGCCA CGCGGGGCAC GCCCGAGGAG GTCGGTTTCG ACCTGTTCAC CGTGGCCGAC GAGATGCGTG ATCGGGGCTG GTACGTCCAA CCGCAGTTCG CGCACGGGCA TTCGCCGGTG AATCTGCATC TGACCGTGAC GGCCGCCAAT CGGGGGTCGG AGCAGGAGTT CGTCGTCGAC CTGCGGGACT CGGTGGAGGC CGCGTGCGCG GCGGGGCCCG TGTCGGTGGA CCCGTCGTTG CGGGAGTTCC TTCTCACCCT CGATCCCGAC CGGCTCACCC CGGAACAGTT CGCCGGACTG CTCGCGGGGG CCGGTCTGGC GCCGGGTGAG GGGGAGGGCA CCGGGCTGCC GAAGCGGATG GCGTCGATCA ACGCACTGCT CGACGCGGCA CCCGCCCGAC TGCGGGAACG GGTGTTGCTG GAGTTCCTAG CCCTGCTCTA CCGACCGACT CCGAGCGCAT GA
|
Protein sequence | MSIEDVLARV RALRADDAPT HGGRTLAYVY DSGLAELDEL GARAHALASS ANALDPTTFP GLLRMENDLV ATTAALLGGT DETVGTVTSG GTESCLLAVL AARQGRPDVA DPALVVPTTV HAAFRKAAHY FGLRLVEVEV DPVTFRADAA AMASAIDDDT VLVVASAPSY AHGVIDPIPE IAAAAAARGV RMHVDACIGG WVLPYLRRLG VDGPAFDFSV EGVTSISVDL HKYAYCPKGT SVLLFANAEA RRGHYFGCAD WPGYTMLNTT LQSTRSGGPL AAAWAVVTHL GEDGYLRLAR ETLFAVREIR HGIESIEGLR ILGEPDSTLL AVATRGTPEE VGFDLFTVAD EMRDRGWYVQ PQFAHGHSPV NLHLTVTAAN RGSEQEFVVD LRDSVEAACA AGPVSVDPSL REFLLTLDPD RLTPEQFAGL LAGAGLAPGE GEGTGLPKRM ASINALLDAA PARLRERVLL EFLALLYRPT PSA
|
| |