| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_19780 |
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| Symbol | |
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| ID | 8387305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2109631 |
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| End bp | 2111001 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976041 |
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| Product | SPFH domain, Band 7 family protein |
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| Protein accession | YP_003133823 |
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| Protein GI | 257055991 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.295891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000474854 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATCATCA CGCTCTCGAA GTCACTGATG GTGGTGCCAC AAGCGCAATC GGCGGTCATC
GAACGGCTCG GCCGGTTCCG CACGGTCGCC GGACCGGGAC TGAACTTCCT GGTGCCGTTT
CTGGACAAAG TGCGGGCCAG GGTCGACTTG CGCGAGCAAG TGGTGTCCTT CCCGCCGCAG
CCGGTCATCA CACAGGACAA CCTGACCGTG TCCATCGACA CGGTCGTGTA CTTCCAGGTC
ACCGATTCAC GCGCGGCGGT GTACGAGATC TCGAACTACA TCGTCGGTGT CGAACAACTG
ACCACCACCA CGCTGCGTAA CCTGGTCGGC GGCATGTCGC TGGAGGATGC ACTCACCTCC
CGTGACCAGA TCAACAGCCA GCTGCGGGGT GTGCTCGACG AGGCCACCGG CCGGTGGGGT
ATCCGCGTGG CCCGGGTGGA GTTGAAGGCG ATCGATCCGC CGCCTTCCAT CCAGGACTCG
ATGGAAAAGC AGATGCGCGC CGACCGGGAG AAGCGCGCCA TGATCCTCAC CGCCGAAGGT
GAGCGCGAGT CGGCCATCAA GACCGCCGAG GGGCAGAAGC AAAGCCAGAT CCTCGCCGCC
GAGGGCGCCA AGCAAGCGGC CATCCTGGCC GCGGAGGCCG AACGGCAGTC CCGCATTCTG
CGCGCACAGG GTGAACGCGC CGCCCGCTAC CTGCAGGCGC AGGGTCAAGC CAAGGCCATC
GAGAAGGTGT TCGCCGCGAT CAAGGCGAGC AAGCCGACCC CGGAGGCGTT GGCCTACCAG
TACTTGCAGA CGTTGCCGCA GATGGCGCAG GGCGACGCCA ACAAGGTGTG GCTGGTGCCC
AGCGACTTCG GCAAGGCCCT CGAAGGGTTC GCCCGCCAGT TCGGCACCAA GGGCGACGAC
GGTGTCTTCC GCTACGAACC GCCCGCCGAG GAGACCCCCT CACCCTCGAT GGACGACGAG
GAGGTCGCAG GATGGTTCGA CACGAGCACC GACCCCAAGG TCGCCGAAGC GGTGCGGGAA
GCCGAGGCCG TGGCCCGGCA GGAAGTGCCC AGCCCACTGA CCAGCCCCGG TGGTCCCACT
CCGCCCGCCG CGTCGGTGTT GAAGGGATCG GGATCCCAGC CTGCTGAACC GCCGACGGCG
AGCACATCGG AACCCTCGCC GCAGCCTCCG ACACCGCCGG CGGTGCCCCC GGCCCAGCCG
CAGCCGCCCG CTACGCCACC GAACCCGCCA CAGCAGCAGG GTGGCGGTGT CCCGTTCGGC
GGCCCCCAGC CGGGTAACTA TCCGCCCCAG GGTGGACAGC CGCCCCAGGG TGGACAGCCG
CCCCAGGGTG GGCCCATGCC CCCACAAGGC CCGCCTTTCG GCCGGCAGTG A
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| Protein sequence | MIITLSKSLM VVPQAQSAVI ERLGRFRTVA GPGLNFLVPF LDKVRARVDL REQVVSFPPQ
PVITQDNLTV SIDTVVYFQV TDSRAAVYEI SNYIVGVEQL TTTTLRNLVG GMSLEDALTS
RDQINSQLRG VLDEATGRWG IRVARVELKA IDPPPSIQDS MEKQMRADRE KRAMILTAEG
ERESAIKTAE GQKQSQILAA EGAKQAAILA AEAERQSRIL RAQGERAARY LQAQGQAKAI
EKVFAAIKAS KPTPEALAYQ YLQTLPQMAQ GDANKVWLVP SDFGKALEGF ARQFGTKGDD
GVFRYEPPAE ETPSPSMDDE EVAGWFDTST DPKVAEAVRE AEAVARQEVP SPLTSPGGPT
PPAASVLKGS GSQPAEPPTA STSEPSPQPP TPPAVPPAQP QPPATPPNPP QQQGGGVPFG
GPQPGNYPPQ GGQPPQGGQP PQGGPMPPQG PPFGRQ
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