Gene Svir_19140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19140 
Symbol 
ID8387241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2035729 
End bp2036295 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content68% 
IMG OID644975980 
Producthypothetical protein 
Protein accessionYP_003133762 
Protein GI257055930 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0125477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.347466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACGC GCAGGGACCA GGTACTCGAC GCCGCCATCC GCGTCCTCGG CACCCGCGGA 
ATGCGGCAAC TCACCCACCG GGCCGTCGAC GCCGAGGCAC GCCTGCCCGA GGGTTCCACC
TCCAACTACT TCCGCAACCG CGAAGCGCTC GTGGCGGGCG TGCTCGACCG CCTCGTCGCC
CAGGACGAAC AGGCGTGGGG TTTGTTCTCC GCGGACCTGA GCAACATCAC CTTGACCCCG
GACGCGTTCA TCGACGCCGT GACCCAGTTC GTGGTGGAAT TGGCCGCCGC CGCGCGGATC
TCCACACTCG CCCGGCACTC GATCTTCCTG GAGGCCGCGC ACCACGAACA CCTGCGTCGC
CAGGTGGAGT CCCGCAGGGA CACGCTGCTG ACCTGGGGCG CGTCCTGGCT CGAACAGTTG
GGTTCGCCGC ACCCGGAACG TGATTTCGCG ACCCTGCGCG CCCTGCTGGA CGGTCTGTTG
TTCTACCAAT GCACGCTGCC CGATCCCGAG TTCGATCCGA CGCTCGCCAT CCGCGCCCTG
TTCGACGGGC TACGTAAGCA CTGGTGA
 
Protein sequence
MTTRRDQVLD AAIRVLGTRG MRQLTHRAVD AEARLPEGST SNYFRNREAL VAGVLDRLVA 
QDEQAWGLFS ADLSNITLTP DAFIDAVTQF VVELAAAARI STLARHSIFL EAAHHEHLRR
QVESRRDTLL TWGASWLEQL GSPHPERDFA TLRALLDGLL FYQCTLPDPE FDPTLAIRAL
FDGLRKHW