Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_14560 |
Symbol | |
ID | 8386789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1503085 |
End bp | 1503444 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975535 |
Product | predicted nucleic-acid-binding protein implicated in transcription termination |
Protein accession | YP_003133323 |
Protein GI | 257055491 |
COG category | [K] Transcription |
COG ID | [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00191039 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGCGAC ACCCACAGCC GAGTTCGATG CGACATGCGG ACGGAACCTC ACCGGTCCGT CTGTGTGTCG GGTGTCGGCA ACGGGCGTCG GTCGACGAGT TGTTACGTGT GGTCGCATTG GACGGGCAGT TAGTCGTCGA CGAACGTCGG CGGCTGCCGG GCCGAGGGGC CTGGGTGCAC CTGGATCCGG ACTGCGTGTC CAAGGCCGAG AAGCGGCGGG CGTTCCCCCG GGCCCTTCGG GTCAGGGGGG TGCTCAACGC CGACGGTGTG CGGCATCATG TTCAACGGCT CGTCGAGCAA GGCGGGCGCG GATATCCCGC GTCTGGAGAC GGTACAAGGA AGCAGGTCGA CCCGTCATGA
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Protein sequence | MVRHPQPSSM RHADGTSPVR LCVGCRQRAS VDELLRVVAL DGQLVVDERR RLPGRGAWVH LDPDCVSKAE KRRAFPRALR VRGVLNADGV RHHVQRLVEQ GGRGYPASGD GTRKQVDPS
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