Gene Svir_14560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_14560 
Symbol 
ID8386789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1503085 
End bp1503444 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content67% 
IMG OID644975535 
Productpredicted nucleic-acid-binding protein implicated in transcription termination 
Protein accessionYP_003133323 
Protein GI257055491 
COG category[K] Transcription 
COG ID[COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00191039 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCGAC ACCCACAGCC GAGTTCGATG CGACATGCGG ACGGAACCTC ACCGGTCCGT 
CTGTGTGTCG GGTGTCGGCA ACGGGCGTCG GTCGACGAGT TGTTACGTGT GGTCGCATTG
GACGGGCAGT TAGTCGTCGA CGAACGTCGG CGGCTGCCGG GCCGAGGGGC CTGGGTGCAC
CTGGATCCGG ACTGCGTGTC CAAGGCCGAG AAGCGGCGGG CGTTCCCCCG GGCCCTTCGG
GTCAGGGGGG TGCTCAACGC CGACGGTGTG CGGCATCATG TTCAACGGCT CGTCGAGCAA
GGCGGGCGCG GATATCCCGC GTCTGGAGAC GGTACAAGGA AGCAGGTCGA CCCGTCATGA
 
Protein sequence
MVRHPQPSSM RHADGTSPVR LCVGCRQRAS VDELLRVVAL DGQLVVDERR RLPGRGAWVH 
LDPDCVSKAE KRRAFPRALR VRGVLNADGV RHHVQRLVEQ GGRGYPASGD GTRKQVDPS