Gene Svir_13750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_13750 
Symbol 
ID8386711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1415981 
End bp1417207 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content72% 
IMG OID644975459 
Productesterase/lipase 
Protein accessionYP_003133249 
Protein GI257055417 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.197009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.100761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGG AGCCCGCCCC GGCCGAGCCC GGCCGACTCC GCACCGGCCT CGGCCGGGCG 
GCCCTGGCAC TCTCCGCCCT GAGCGCCGTC GCTCTCGTCG CGGCCGCCGC ACTCGTGCTG
CTGCCCCCGC CCTCGTACGA CGTCTGGCAG CTCGCCCTGC TCGTCCTGGA GTTCGCGCTG
GTCCCGGCCG GTGTCGCACT GGCCGGAACC GCGCTGGCCG TCCTCGCCCT GCGCTGGACC
ACGTGGCGCC GCACCAGCAC GGTCGTCGCG GGACTCAACG CGGTCGCGCT CGTCGCCGCA
CTCGTCCCAC CGGTGGCTCT GTGGAACACC GCGCGCCACC ACGACGTGTC GCTGTCCCTG
CCCGACTACG TCGCCGGACT CGCCGTCGAC ACCGACCGGG CACCGGAGAC CGTGCGCTAC
GCCACCGTCG ACGGCGAGGA CCTCATGCTC GACGTGTGGC GACCCGGGAA GCCGGGAACC
GGGGAACCGC TGCCCGTCGT GATCAACGTC CACGGGGGCG CGGAGGACTA CCCCCAGAGC
ATGTTCCCCC GCTGGGACAC CTGGCTCGCC GACCAGGGAT ACGTCGTGTT CGACATCGAC
TACCGTTTCT TCCCCCACGG CGACTGGCAG GCGGCTCCGG GAGACGTCAA GTGCGCGGTG
AGCTGGGTAC GCCGACACGC GAAGGACTAC GGCGCGGACC CCGACCGCAT CGCGCTCATG
GGGCAGTCGG CGGGCGGCCT GCTCACCCTC CTCGCCTCCT ACAGCACGGA CGAGCAGATC
CCGTCGAGCT GCCCCGAGCA CCGCGAGTCC ACCGACGTCC AGGCGGCCAT CGCCTGGTAC
ACCGCCACCG ACGCCACCGA GGCGGCGGTG CTGCCGTGGC GGCTGCGGCA CTCGGCCGAG
ATCGGGCCTG ACCTCGAACA GCAGCAGGAA CGGATGACCG GGGCGGTCGC GGGCACCGAG
CAGGCGCGGC GGCTGAACCG CGCGCTGTCG CCCATCACCT ACGTCGACGC CCAGGCCCCG
CCGACCCTGC TCATCCAGGC CGGGCACGAC GTGTTCGTCT CACCGGAGGA CATCCGCGCC
TTCGCCGACC GGCTGGAGCG CGCCGGAGTC ACCCACCGGG TGTTGAGTCT GCCGTGGACG
GAACACATGT TCGACCTCAA CTGGGGTGGC TTCGCAAGCC AGATCACCCG AGAGGTCCTG
GCCCGCTTCC TCGCCGAACG GCTCTGA
 
Protein sequence
MKPEPAPAEP GRLRTGLGRA ALALSALSAV ALVAAAALVL LPPPSYDVWQ LALLVLEFAL 
VPAGVALAGT ALAVLALRWT TWRRTSTVVA GLNAVALVAA LVPPVALWNT ARHHDVSLSL
PDYVAGLAVD TDRAPETVRY ATVDGEDLML DVWRPGKPGT GEPLPVVINV HGGAEDYPQS
MFPRWDTWLA DQGYVVFDID YRFFPHGDWQ AAPGDVKCAV SWVRRHAKDY GADPDRIALM
GQSAGGLLTL LASYSTDEQI PSSCPEHRES TDVQAAIAWY TATDATEAAV LPWRLRHSAE
IGPDLEQQQE RMTGAVAGTE QARRLNRALS PITYVDAQAP PTLLIQAGHD VFVSPEDIRA
FADRLERAGV THRVLSLPWT EHMFDLNWGG FASQITREVL ARFLAERL