| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06180 |
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| Symbol | |
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| ID | 8385956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 634941 |
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| End bp | 636020 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644974715 |
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| Product | Nucleoside-diphosphate-sugar pyrophosphorylase family protein |
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| Protein accession | YP_003132516 |
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| Protein GI | 257054684 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0622435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCCG TGTCGGGTGT CGATGCCGTG ATCCTGGTCG GGGGTAAGGG CACGCGGTTA
CGTCCGCTGA CGCTGTCGGC ACCCAAGCCG ATGTTGCCCA CCGCGGGTGT TCCGTTCCTG
TCCCACGTGC TCTCCCGCAT CCGTGCGGTG GGGATCACGC ACGTGGTGCT CGGTACGTCG
TACCGGGCCG AGGTCTTCGA GGAACACTTC GGTGACGGCT CCGAGCTCGG GCTCGACATC
GAGTACGTGG CGGAATCGGA ACCGCTGGAC ACGGGCGGGG CGATCCGCAA CGTCGCCGAT
CGGCTGCGCA ACGACGACGT GGTGGTGTTC AACGGCGACA TCCTCTCCGG CGCGGACCTC
GGTGCACTGG TGACCACGCA TCGCGAAGTG GCGGCCGACG TGACCCTGCA CCTCCAGCGG
GTCGACGACC CGTCCCGGTT CGGCTCGGTC CCCACCGACG CCGACGGTCG GGTCACGGCG
TTTCTGGAGA AGACCCCCAA TCCCCCCACC GACCAGATCA ACGCGGGCTG CTACGTGTTC
CGGCGTTCGG TGATCGAGGA GATCCCGGCG GGCCGGCCGG TGTCCGTGGA ACGTGAAACG
TTCCCCGGCC TGTTGGAGAG CGGTCGGCAC GTGCACGGCT TCGTCGACGA TTCGTACTGG
CTCGACGTCG GGACCCCGGA GGCGTTCGTG CGCGGTTCGG CCGACCTGGT CACCGGTGTG
GCCCCCACGG AAGCCCTGCC GGGACCCACG GGCGAGCGGC TCGTGCTCGA CGGTGCCTCG
GTGGCCGACG ACGCCGTGGT CACCGACGGG TCGACGATCG GCGCGGGCGC GTACGTGGCC
TCGAGCGCGC AGGTGCGCGG TTCGGTGCTG TTCGACGGCG CGTCGGTGGC CGAAGGGGCC
GTGGTGGAGC GGTCGGTTCT CGGGAAGGGG GCGCGGGTCG GCAAGGGTGC CGTGTTGCGT
GGGGTCGTCG TCGGGGACGG GGCGTCGGTG GGGGCCGACT GCGAACTGCT CGACGGCGCG
CGGGTGTGGC CGGACGTCGA ACTGCCCGAG TCGGCGATCC GGTTCTCCAG CGATGCCTGA
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| Protein sequence | MASVSGVDAV ILVGGKGTRL RPLTLSAPKP MLPTAGVPFL SHVLSRIRAV GITHVVLGTS
YRAEVFEEHF GDGSELGLDI EYVAESEPLD TGGAIRNVAD RLRNDDVVVF NGDILSGADL
GALVTTHREV AADVTLHLQR VDDPSRFGSV PTDADGRVTA FLEKTPNPPT DQINAGCYVF
RRSVIEEIPA GRPVSVERET FPGLLESGRH VHGFVDDSYW LDVGTPEAFV RGSADLVTGV
APTEALPGPT GERLVLDGAS VADDAVVTDG STIGAGAYVA SSAQVRGSVL FDGASVAEGA
VVERSVLGKG ARVGKGAVLR GVVVGDGASV GADCELLDGA RVWPDVELPE SAIRFSSDA
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