| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06120 |
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| Symbol | |
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| ID | 8385950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 627467 |
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| End bp | 629983 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644974709 |
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| Product | predicted glycosyltransferase |
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| Protein accession | YP_003132510 |
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| Protein GI | 257054678 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.345441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.721654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGGCCC AGGGGGAAAC CGCACAGCCG TCGGTCTCTG TCGTCGTCGT CAACTACCGC
GGTGCCGACG ACACCATCGC GTGCCTACGC GCGCTCAGCG AACTCGACTA TCCACGCCTG
GAGATCATCT GCGTCGACAA CGCCTCTCCC GGCGACGATG CCGACCGCAT CCGAGCCGCC
GTGCCGTCGG CGACGTTGAT CGCGGCCGAA CGCAATCTCG GCTTCGCGGG CGGCTGCAAT
CTGGGTGCCC GGCACGCGCA GGGCACGGTG TTGGCGTTCC TCAACAACGA CGCCCGCCCC
CATCCACGCT GGATCGACGC CGCCGTCACG GCCCTGCGCG CGGACCCGAC CGTCGCCGCC
GTCGCCAGCA AGGTGCTCGA TCTCGACGGT GAGAAGGCCG ATTTCGTCGA CGGCGGACTG
ACGTGGTTCG GCATGGGCTA CAAACGCCAC GCCGACACCC CGATCGCCGA CCTGCCGCAG
GCCGAGCACG ACACCGCCAA GGACGTGCTG TTCGCCACCG GATCGGCCAT GTTCGTGCGG
GCGAGTGTGT TCGCGGAACT GGGCGGGTTC GACGACGACT TCTTCATGTT CTACGAGGAC
GTCGACCTCG GCTGGAGACT CAACCTGCGA GGTTGGCGGG TGCGGTACGA ACCCGCGTCG
ATCGCCTACC ACCGCCACCA CGGCACGATG TCCGCGGTGG ACGCCCCCGA CAGCGGCAGG
GAGACGTTCC TGCTGGAGCG CAACGCCCTG TGCGCGCTCT ACAAGAATCT GTCCGACGAC
ACGCTGGCGA AGGTGTTGCC CGCCGCGTTG GCGTTGACCG TGCGCCGCGC CACCGCCCGG
GGTGAACTCG ACCCCGCCCT GCTCGACCTG GCGTCCGGCG TCGGTCCGCC CGAGACCACG
CCCGTACCGG TGTCCCGGAG CGCGCTGGCG GGCGTGTTGG CGATCGACGC GTTCGTGGAG
CGGCTGCCGG CCTTGGCCGA GGCACGGGCG GAGGAACAGG CCAAACGCGT CCGCACCGAC
GCGGACCTGC TCCCGCTGCT GCGCAAGGCG TTGGAACCCG CCTACCCCCT GCCGCGGTAC
CTCGCCGCCC ACGACATCCT GACCGAGGTC TTCGGCATCG AGGACGCCTT CGGCAGCCGT
CGTTCGATCT GTGTCATCAC CGGGGACACG CTCACCAGCC GGATGGCCGG GCCCGCCATC
CGCGCGTGGA ACATCGCCGA CGTGCTGTCT CGCGAACACG ACGTGCGGCT GGTGACCGTC
AACCCGGTCG CCGATCCCCC GCCGGCACCG TTCCCGGTGG TGGCCGCGAG CAGACACGAA
CTGGACCATC ACGTCGCCTG GGCGGATATC GTGATTCTCC AGGGGCACAT CCTGGAACTG
GCCCCCTCGC TCAAGCACGA GTACGCACAC AAGATCGTCG TCTGCGACGT GTACGACCCC
ATGCACCTGG AACTGCTGGA ACAGGGCCGC GACGCACCCG ACGACATCCG CGAGGCGGAC
CTCGCCGGCG TCACCAAGGT CCTCGACGCC CAGCTGGAGC GCGGCGACTT CTTCCTGTGC
GCCTCGGAGC GACAGCGGCA CCTGTGGCTC GGCCACCTCA CGGCGCTGGG CCGCCTGTCC
CCCCGGCTGT ACGACGCCGA CCCGACGACC CGGTCGCTGC TGGCCGTGGT GCCGTTCGGG
CTGTCACCCG AGCCTCCGCG CCGCACCGGT CCCGGGCTGC GCGCCAAGCT CGGGATCGCC
GCCGACGATC GCGTGGTGTT GTGGGCCGGT GGGGTCTACA ACTGGTTCGA CCCGCTCACG
CTCATCCGTG CCGTCGACCT GCTGAGCACC GAGTGCCCCG ACGTGCGGTT GGTGTTCCTC
GGCATGAAAC ACCCGAACCC CGAGGTCGGC GAGATGGACA TCGCCGGGCG CACGCAACGC
CTCGCCGACA AGCTGGGGCT GACCGGCAAA CACGTGTTCT TCAACGAGGG GTGGGTGCCC
TACGACGAGC GGCAGAACTG GCTGCTCGAC GCCGACTGCG GGGTCACCAC CCATTTCGAG
CACGTGGAGA CCATGTTCGC CTTCCGCACC AGGGTCCTCG ACTACCTGTG GGCGGGCCTG
CCGATCGTCA CCACCGACGG CGACGCTTTC GCCGACCTGG TCCGGGACGA ACGACTCGGC
GTGGTGGTGC CCGCGGAGGA CCCGGAGGAA CTGGCCAAGG CCCTGAAGCG GTGTCTGTAC
GACACCGAGT TCGCGCAGGG CTGTCGCGAG CGCATGGTCG CCGTGGCCGA GCGGTTCACG
TGGCCGAACG TGTTGCGCCC ACTGGTGGAG TTCTGCCGCG ATCCACGCCC GGCCGCCGAC
CGTCTGCCGG GCGGTGACCA CCTCGCCCCC TCGCCGCCGA AGAGCGCGGC CGAGCTGGTG
CGACGTGACC TCGCGCTCGT GAGGTCCTAT CTTGCCGAAG GAGGTCCCTC AGAACTCGCC
CGCAGGGTCA AGGGGCGGGT TCTCAAGCTC GCCCGCCGAG GACTGCGCCG TGGCTAA
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| Protein sequence | MLAQGETAQP SVSVVVVNYR GADDTIACLR ALSELDYPRL EIICVDNASP GDDADRIRAA
VPSATLIAAE RNLGFAGGCN LGARHAQGTV LAFLNNDARP HPRWIDAAVT ALRADPTVAA
VASKVLDLDG EKADFVDGGL TWFGMGYKRH ADTPIADLPQ AEHDTAKDVL FATGSAMFVR
ASVFAELGGF DDDFFMFYED VDLGWRLNLR GWRVRYEPAS IAYHRHHGTM SAVDAPDSGR
ETFLLERNAL CALYKNLSDD TLAKVLPAAL ALTVRRATAR GELDPALLDL ASGVGPPETT
PVPVSRSALA GVLAIDAFVE RLPALAEARA EEQAKRVRTD ADLLPLLRKA LEPAYPLPRY
LAAHDILTEV FGIEDAFGSR RSICVITGDT LTSRMAGPAI RAWNIADVLS REHDVRLVTV
NPVADPPPAP FPVVAASRHE LDHHVAWADI VILQGHILEL APSLKHEYAH KIVVCDVYDP
MHLELLEQGR DAPDDIREAD LAGVTKVLDA QLERGDFFLC ASERQRHLWL GHLTALGRLS
PRLYDADPTT RSLLAVVPFG LSPEPPRRTG PGLRAKLGIA ADDRVVLWAG GVYNWFDPLT
LIRAVDLLST ECPDVRLVFL GMKHPNPEVG EMDIAGRTQR LADKLGLTGK HVFFNEGWVP
YDERQNWLLD ADCGVTTHFE HVETMFAFRT RVLDYLWAGL PIVTTDGDAF ADLVRDERLG
VVVPAEDPEE LAKALKRCLY DTEFAQGCRE RMVAVAERFT WPNVLRPLVE FCRDPRPAAD
RLPGGDHLAP SPPKSAAELV RRDLALVRSY LAEGGPSELA RRVKGRVLKL ARRGLRRG
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