Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_06020 |
Symbol | |
ID | 8385940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 615103 |
End bp | 616437 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974699 |
Product | Protein of unknown function (DUF2029) |
Protein accession | YP_003132500 |
Protein GI | 257054668 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.179625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCACCA CGGATACTCA GATTCAGACG GCGGGCGGGG AGAAGCACCT GTCGTTGCGG GAGTCGCTCG GCAGGTTGTC CGTTCGGCCA CGTTCGGTGG CGCTGCTCGC GCTACTGCCC GTCCTCGCCG TGGTGACGGG CGTGCTGGGC TGGGTGTTCG ATTGGCGGTT GGGCGTCGAC AGCGCGGTGT ATCGGGCCGG CGCGTTGACG CTGTTGCAGG GCGAGTCGCT CTACGAGGGG GACACCCTCG GCTCCGAACC GTGGTGGGCG CTGTTGCCGT TCACCTATCC GCCCGCGGCG GCGCTGTTGT TCACACCACT GGCGTTCTTC CCGGTGCAGG TCGCGTGGGG CGTGGTCTCG GCCGTGTCCT TCCTGGCCTT GGCCCTGGTG GTCCGGGTGA CGATCGCCTC GTTGCCCCGC CTCGTCGGTG AGTTGCCGCG ATGGGCCTCG CCCGCGCGGG CCACGCTGAT CTTCACGATC GTGTTCTTCG GGTTGGAACC CGTGTGGCGC ACGGTCTTCC TCGGCCAGAT CAACATCATC CTGATGGCGC TGGTCATGCT GGACGTGCTG GTGGTGTGCC GGCGCGACAG CCGCTGGGGC GGTGTGCTCG TGGGGGTGGC CGCGGCCGTC AAACTCACCC CGCTCATCTT CATCCCGCAC CTGTTGTTCA CCGGCAGGAA GTGGGACGCC GCGAGGGCGC TGGCCACGTT CGCGGGACTT CAGGCGTTGA TGTTCGTGAT CGTGCCCGCC GACGCCACGC GGTTCTGGAC GCACACGGTG TTCAACCAGG GTCGGATCGG CCCCATGCAC TGGGCGGGCA ACCAGTCGCT CAACGGTCTG CTCAACCGGG TCACCGACCT GGCGCCGTGG GCCTCCACGG CGGCGCTCGG TATCGGTGCG CTGTTGGCCC CGTTCGCGGT GTGGGTGATG CTGCGGTTCC ACCGGCGCGG ACAACACCTG TACGCGCTGC TGGTCACGGC GTTCTACGCG TTGTTGGTCT CGCCCGTGTC GTGGTCCCAC CACTGGGTGT GGGCGGTTCC GCTCATCGTC GCGCTCGTGG CTCGGTTGCC GCGGACCAAT CCCACCACGG CGTGGCGCAG CTGGGTGCTG GCCGGTTCGG TGACCGTCGT GTTCGTCAGC TGTGTACTGC TGGTGCTGCC CAACGGCCGT AACCTCGAAC TGCACTGGGA GGTCTGGCAG TTCGTGCTCG GCAGCGCCTA CCTGTTGGTC CCGGTGATGC TGGCCGCTGC GCTCGGCATC CGATGGCTGA CCCGCCGTAG GCGGATCGCT GTGGCGGCCG CCGGAGCGGA CGGTCGACCG GCGCGGCCGA ACTGA
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Protein sequence | MSTTDTQIQT AGGEKHLSLR ESLGRLSVRP RSVALLALLP VLAVVTGVLG WVFDWRLGVD SAVYRAGALT LLQGESLYEG DTLGSEPWWA LLPFTYPPAA ALLFTPLAFF PVQVAWGVVS AVSFLALALV VRVTIASLPR LVGELPRWAS PARATLIFTI VFFGLEPVWR TVFLGQINII LMALVMLDVL VVCRRDSRWG GVLVGVAAAV KLTPLIFIPH LLFTGRKWDA ARALATFAGL QALMFVIVPA DATRFWTHTV FNQGRIGPMH WAGNQSLNGL LNRVTDLAPW ASTAALGIGA LLAPFAVWVM LRFHRRGQHL YALLVTAFYA LLVSPVSWSH HWVWAVPLIV ALVARLPRTN PTTAWRSWVL AGSVTVVFVS CVLLVLPNGR NLELHWEVWQ FVLGSAYLLV PVMLAAALGI RWLTRRRRIA VAAAGADGRP ARPN
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