| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05890 |
|---|
| Symbol | |
|---|
| ID | 8385927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 601411 |
|---|
| End bp | 603051 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644974686 |
|---|
| Product | acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| Protein accession | YP_003132487 |
|---|
| Protein GI | 257054655 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.35884 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTG CGACGGAGCC ACTCGGAACG CCCCCGGCCG AGGAACCGGA CATCCACACC
ACGGCCGGAA AACTCGCCGA TCTCTACCGG CGTTACTCGG AAGCCATCCA CGCAGGTTCC
GCCCGCGCCG TGGAACGGCA GCACGCCAGG GGCAAGAAGA CCGCTCGAGA GCGGATCGAC
ATGCTGCTCG ACCCCGGTTC GTTCGTGGAA CTGGACGCAC TGGCCCGCCA CCGCTCCACC
AACTTCGGAC AGGAACGCAA CCGCCCTTAC GGCGACGGCG TCGTCACCGG CTACGGCACC
ATCGACGGCC GCCCGGTGTG CGTGTTCAGC CAGGACGTCA CCGTGTTCGG CGGTTCGCTC
GGTGAGGTCT ACGGCGAGAA GATCGTCAAG GTGATGGACC TGGCGATGAA GACGGGCAGG
CCCATCATCG GCATCAACGA GGGCGCCGGG GCGCGCATCC AGGAGGGTGT GGTGTCGCTG
GGCCTCTACG CCGAGATCTT CCGCCGCAAC ACCCACGCCT CCGGGGTGAT CCCACAGATC
TCCCTCATCA TGGGCGCCAA CGCGGGGGGA CACGTGTACT CCCCCGCGCT CACCGACTTC
GTGGTGATGG TCGACAAGAC CTCGCAGATG TTCATCACCG GCCCCGACGT GATCAAGACG
GTGACGGGTG AGGAGGTGAC GCTGGAGGAA CTGGGTGGTG GGCGCACCCA CAACACCAAG
TCCGGCAACG CGCACTACCT CGCCGCGGAC GAGGAGGACG CCATCTCCTA CGTCAAGGAG
TTGCTGTCGT ACCTGCCGTC CAACAACCTG TCCGAGCCGC CGGTCTTCGA CGCACCCGCA
CCGACCGAGG GCTCCATCGC CGACGACATC ACCGACTCCG ACCGAGAGCT CGACACGCTG
ATCCCGGATT CACCCAACCA GCCCTACGAC ATGCGCGAGG TGATCTCGCG GGTACTCGAC
GACGGCGAGT TCTGCGAAGT ACAGGAACTG TTCGCGCCGA ACATCATCAT CGGGTTCGGT
CGCGTGGAGG GGCACAGCGT GGGTGTGGTG GCCAACCAGC CGACCCAACT GGCGGGCTGC
CTCGACATCA ACGCCTCCGA GAAGGCCGCT CGTTTCGTGC GCACGTGCGA CGCCTTCAAC
ATCCCCGTGT TGACGTTCGT GGACGTGCCC GGTTTCCTGC CCGGCACCGA CCAGGAGTGG
AACGGCATCA TCCGGCGCGG CGCGAAACTC CTCTACGCTT ACGCCGAGGC CACGGTCCCG
CTGGTCACGG TCATCACGCG CAAGGCGTAC GGTGGGGCCT ACGACGTCAT GGGGTCCAAG
CATCTCGGCG CCGACATCAA CATCGCGTGG CCCACGGCGC AGATCGCGGT GATGGGCGCG
CAGGGCGCGG CCAACATCGT GCACCGTAAG CGGTTGGCCG AGGCCGCGGA GGCGGGTGAG
GACGTCGAGG CGCTGCGCAG TCAGTTGATC CAGGAGTACG AGGACACGCT GTGCAACCCG
TACGTGGCCG CCGAACGCGG ATACGTGGAC AGCGTCATCC CGCCGTCGCA CACCCGTGGC
CACGTCGCCA GGGCGCTGCG GATGCTGCGC GACAAGCGCG AGACCCTGCC ACCGAAGAAG
CACGGCAACA TCCCCCTGTG A
|
|---|
| Protein sequence | MSSATEPLGT PPAEEPDIHT TAGKLADLYR RYSEAIHAGS ARAVERQHAR GKKTARERID
MLLDPGSFVE LDALARHRST NFGQERNRPY GDGVVTGYGT IDGRPVCVFS QDVTVFGGSL
GEVYGEKIVK VMDLAMKTGR PIIGINEGAG ARIQEGVVSL GLYAEIFRRN THASGVIPQI
SLIMGANAGG HVYSPALTDF VVMVDKTSQM FITGPDVIKT VTGEEVTLEE LGGGRTHNTK
SGNAHYLAAD EEDAISYVKE LLSYLPSNNL SEPPVFDAPA PTEGSIADDI TDSDRELDTL
IPDSPNQPYD MREVISRVLD DGEFCEVQEL FAPNIIIGFG RVEGHSVGVV ANQPTQLAGC
LDINASEKAA RFVRTCDAFN IPVLTFVDVP GFLPGTDQEW NGIIRRGAKL LYAYAEATVP
LVTVITRKAY GGAYDVMGSK HLGADINIAW PTAQIAVMGA QGAANIVHRK RLAEAAEAGE
DVEALRSQLI QEYEDTLCNP YVAAERGYVD SVIPPSHTRG HVARALRMLR DKRETLPPKK
HGNIPL
|
|---|
| |