Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_03150 |
Symbol | |
ID | 8385653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 310452 |
End bp | 311726 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974415 |
Product | geranylgeranyl reductase family protein |
Protein accession | YP_003132223 |
Protein GI | 257054391 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.992088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.897834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCACG ACGCCGAGGT CATCGTCGTC GGTGCGGGCC CGGCGGGCTC CACCGTGGCC ACCTATCTCG CCCGCGCCGG TGTTGACGTT CTGTTGTTGG AGAAGACGGG TTTCCCCCGC GAGAAGGTGT GCGGTGACGG ACTGACACCG CGTGGGGTGA AGCAGCTCAT CGATCTCGGT ATCGACACCA GTCGTGAGGC CGGTTGGATG CACAACAGGG GGCTGCGCAT CTTCACCGGT GAGTTGATGC TCGAACTCGA CTGGCCCGAC CTGACGTCCT ACCCGCCCTA CGGGGTGTCC CGCACGCGGC ACGACTTCGA CGAGCTCCTC GCCAAGACGG CGGTCGAGGC GGGTGCGCGG TTGTTGGAAC GCACCACGGT GACCGGCGCG ATCACCGACG AACGCACGGG CCGGGTCGTC GGGGTGGAGG CGAAGCGGGG ACCCGAGCGC AAGCCCGTCA GTTACCGGGC ACCTCTCGTG CTGGCCTGTG ACGGCGTGTC CGCGCGGCTG GCGCTGTCGG TGGGGATCGA GAAGAACGAC AGCCGTCCCA TGGGGGTGGC GGTGCGTCGT TACTACCGCA GTCCCCGGCA CGACGAGGCC TACATCGAGG GCCACCTGGA GCTGTGGGAT CGCAGCGATC CCCGCGATCC GAAGCTGCTT CCCGGCTACG GGTGGGCGTT CCCGCTCGGT GACGGCACCG TCAACGTGGG GCTGGGGATG CTGTCCACTT CGAAGTCGTT CCGCAACATC GACTACCGCA AGTTGCTGCA TTCGTGGCTC GCCTCCACCC CGGAGGAGTG GGGGTATCGC GAGGAGAACG CGGTCGGTCG CATCGGTGGG GCCGGCATCC CGATGGGGTT CAACCGCACC CCGCACTACC GGAACGGACT GTTGTTGCTC GGTGACGCGG GCGGCATGGT GAGTCCGTTC AACGGTGAGG GCATCGCGGC GGCGATGGAG TCGGCCCGGG TCGCCGCGGA ACACGTCGTG CAGGCGCTCG CGCGGCCGGA GGGTGCGTCG CGGGAGCGGG TGTTGCACGG CTATCCCCGG GTGATGGCCG ATCGCATGGG CGGCTACTAC CGGCTGGGCA ACCTGTTCGC CAAGGCCATC GGACATCCGA AGGTGATGCG TGCCGCCACC AAGTACGGGC TGCGGATCAG CCCGTTGATC CCCTTGGTGT TCAAGGGACT GTCGGGTTGC TACGAGCACA AGGGCGGCGA TGTCGTCGAC CGGCTCGTGG CGACGCTGTC CCGGATCACC CCGGCGCCGC GTTGA
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Protein sequence | MTHDAEVIVV GAGPAGSTVA TYLARAGVDV LLLEKTGFPR EKVCGDGLTP RGVKQLIDLG IDTSREAGWM HNRGLRIFTG ELMLELDWPD LTSYPPYGVS RTRHDFDELL AKTAVEAGAR LLERTTVTGA ITDERTGRVV GVEAKRGPER KPVSYRAPLV LACDGVSARL ALSVGIEKND SRPMGVAVRR YYRSPRHDEA YIEGHLELWD RSDPRDPKLL PGYGWAFPLG DGTVNVGLGM LSTSKSFRNI DYRKLLHSWL ASTPEEWGYR EENAVGRIGG AGIPMGFNRT PHYRNGLLLL GDAGGMVSPF NGEGIAAAME SARVAAEHVV QALARPEGAS RERVLHGYPR VMADRMGGYY RLGNLFAKAI GHPKVMRAAT KYGLRISPLI PLVFKGLSGC YEHKGGDVVD RLVATLSRIT PAPR
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