| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00890 |
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| Symbol | |
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| ID | 8385427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 91139 |
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| End bp | 92878 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974193 |
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| Product | predicted symporter |
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| Protein accession | YP_003132004 |
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| Protein GI | 257054172 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACTGA ACCCGTGGGC CCTCGCCGGA ATCGCGCTAG TCGCGGCAGC GACTTTGTAT
CTCGGCTACC GCACATCGCA ATCGGCCAGG AGCACCGACG ATTTTCTGGT CGCCCGGCGC
ATGGTGCGTT CGAGGCGCAA CGCCTCGGCC ATTTCCGGTG AGTACATCTG TGCCGCGTCG
TTTCTGGGGG TGTCGGGGCT CGTCCTGAAG GACGGTGCCG ACGCGTTGTG GTTCCCGGTC
GGTTTCACGG CGGGATTCCT CGCGTTGATG ATCTTCGTCG CGGCACCGTT GCGCCGTTCG
GGCGCGTACG CGATTCCCGA TTTCCTGGAA GCCCGGCTGG GCTCCACCGT GGTGCGGAGC
ACCTCCACCT GCTTCGTCGC GGTGCTGGGC CTGATCTACC TGGTGCCACA GTTGCAGGGT
GTCGCCTTGA CGTTGGAGTC GATCGTCCCC GGCATCGAGG GCTGGTGGGG TTCGGTGGTC
GTGGTGACGT TCATCGCGGC CGACGTCATG AGGCGGCGCA TGCGTTCCGC CACCCTGGTG
CAGGCGTTCC AACATTGGAT CAAGCTCTTC GCGCTGGCCA TCCCGACGTT TTTGCTGTGC
GCGGTGTTCC TGGGCAGCGG GGGGCAGGGT TCGGCCGGTG GGCTCGGCGC GGAAGCCCCT
CCCGAGTTCA CCGAGGAGAC CACGGTGACC GTGGGCACCG ACGTGGTCTT GCGGGTCGAC
GAGCCGACGG CGGTGCACGA ACTCGACAAG GAGTCGTTGG AACCGACGGT GTGGCTGCCC
GGTGTGGACT ACCCGGTGCG GGAGGGACAG CGGTTGCTGT TCCCGGCCGG CTCCCTCGTG
CCGATGGTGA ATGACGCCGA ATTGGACAAC GCGGGCTGGC TGCGTCCCAC CGAGGACACC
GACGAGTTGT GGTGGACGTA CTCGCTGATG ACGGCGATGT TCCTCGGCAC GATGGGACTG
CCGCACGTAC TGGCCCGCTT CTACACCAAC CCCGACGGCA GGGCCGCACG CCGCACCACC
GTGCAGGTGC TGTTGTTGCT GGGGGTGTTC TACCTCTTCC CGGTCCTGTT GGGTGCGTTG
TCCCGGCTGT ACGTGCCGGA GTTGTTGGTG ACGGGCGACA CCGACGCGGC CGTGTTGGAG
GTTCCGACCG CCATGCTGCC GGGCGTGGCC GGTCAAATGG TGGTCGCGGT ACTGGCCGCG
GGCGCTTTCG CGGCGTTCGT GTCGGCGTCG TCGGGGTTGT TGGTCAGCGT GGCCGGCACG
ATCGCCACGG ACCTGTTGTG GAACAAGACC AGGGACTTCC GCATCGCGGT GTTCGGTGTG
GCGGGGTTGG CCGCCACCGC CGCGGTGGTG CTGCCGTACG ACGACCTCGG GCACACCGTG
GGGTTGGCGT TCGCATTGGC GGCGTCGACG TTCTGCCCGG TGTTGTTGCT GGGGATCTGG
TGGCGCAAGT TGACGTGGGT CGGTGCGTTG CTGGGGATGC TGGTCGGTGG TCTTGGCGTG
CTCACCGCTG TCGGGTGCTA CGTGGTGTAT CGGGTGAACG GTGAGACGGC GCCGTGGTTC
GTGCTGCAAC CCGCCTTGTT CACGGTTCCG GCGGCACTGT TCACCACGAT GATCGTGAGT
CTCGCCACCG CGCGCCGTGT CCCCGAGGAC GCGGGTGTCG TGATGCTCCA ATTGCACGCT
CCCGACCGGC TCGGGTTCAT GCGGGACCGG CGGGGCGGTG GGCCGGTGGC GAAGCGGTGA
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| Protein sequence | MQLNPWALAG IALVAAATLY LGYRTSQSAR STDDFLVARR MVRSRRNASA ISGEYICAAS
FLGVSGLVLK DGADALWFPV GFTAGFLALM IFVAAPLRRS GAYAIPDFLE ARLGSTVVRS
TSTCFVAVLG LIYLVPQLQG VALTLESIVP GIEGWWGSVV VVTFIAADVM RRRMRSATLV
QAFQHWIKLF ALAIPTFLLC AVFLGSGGQG SAGGLGAEAP PEFTEETTVT VGTDVVLRVD
EPTAVHELDK ESLEPTVWLP GVDYPVREGQ RLLFPAGSLV PMVNDAELDN AGWLRPTEDT
DELWWTYSLM TAMFLGTMGL PHVLARFYTN PDGRAARRTT VQVLLLLGVF YLFPVLLGAL
SRLYVPELLV TGDTDAAVLE VPTAMLPGVA GQMVVAVLAA GAFAAFVSAS SGLLVSVAGT
IATDLLWNKT RDFRIAVFGV AGLAATAAVV LPYDDLGHTV GLAFALAAST FCPVLLLGIW
WRKLTWVGAL LGMLVGGLGV LTAVGCYVVY RVNGETAPWF VLQPALFTVP AALFTTMIVS
LATARRVPED AGVVMLQLHA PDRLGFMRDR RGGGPVAKR
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