Gene Svir_00280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00280 
Symbol 
ID8385366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp24709 
End bp25143 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content68% 
IMG OID644974132 
Producthypothetical protein 
Protein accessionYP_003131945 
Protein GI257054113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.326036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0617221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAACT CGCCGCGAGC CTGGGCACCC AAGCCCGGGC TCGTCGGTGT CGGCTGGGTA 
CTCACCGCCG TCTCCGCCAT CGCGCTCGGC TGGAACATCA CCTCCGGTGA TCGACCGGGC
ACGCTGTTGT TGGCCGTGGT GAGCGCTGCG TTCCTGGCCG CGTCCCTGCA CGGCACCGTC
GTGCGTCCCC GCCTCCTAGC CGACAGCGAA GGGGTGCGCG TACGCACTCT CGGCGGCACC
CACTTCCATC CCTGGTCACG TCTCGGCCTA CGACTCACCA CGACCAGGCG GTACGGCCGT
GACGTCGAAG CACTCGAACT CGACCCCACA GACGGACGAC TCACCGTGTT CGGTTGGGTG
GAACTCGGCA CCGATCCCCA CGACGTGCAC GAGGAGCTAC TGCGGCTGCG TCAGAACCCG
CACAACACCG GGTGA
 
Protein sequence
MDNSPRAWAP KPGLVGVGWV LTAVSAIALG WNITSGDRPG TLLLAVVSAA FLAASLHGTV 
VRPRLLADSE GVRVRTLGGT HFHPWSRLGL RLTTTRRYGR DVEALELDPT DGRLTVFGWV
ELGTDPHDVH EELLRLRQNP HNTG