Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2916 |
Symbol | |
ID | 8385225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 2994996 |
End bp | 2997590 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644973994 |
Product | Peptidoglycan-binding domain 1 protein |
Protein accession | YP_003131810 |
Protein GI | 257053977 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.260808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTCA CACTCGGTGC GGACGGCGAA GCGGTACAGC AACTCCAGGA ACTGCTCGCG GAGCGCGGGT ACGACGTCGG CGAGATCGAC GGCGAGTACG GCCGCCGGAC GAGGGATGCC GTGGCCTCGT TCCAGCGCGA ACAAGGATTG GAACCGACGG GATCGGTCGG GCCGGACACC GCCGAGGAAC TTGACCTCGA TGTCGACTTC GACATGCCGG CGGTGCCGCC GGAACGCGCG AAGTACAAGC AGTTGCTCGC CGAGAACCCT AACTACTTCG GCAACCACCC GGAGCTGGAG TACGAACCAG TCCTCGACAT CACCAGCAAC ACCGATTTCG AGGAACTAAC CTACGTGGGG TACGATCCCG CCGCCGAGCA ACTTGAAGCA GTTGTCTCGG TCAAACGTGA CCACGGGTAC GGGGGCGACC TCTGTACTGA CGGGTCCGTC GAGTTCGTCC GATTTTTCAT CGACCGCGAG CGCAACGGTG ACTGGGAGAA CCTCGGCGTC GGCTCGACCC GGGTCCACGA CCTGCCGGGA CCCAAGCCGG TCGCGTATAC AGTCACGCTC GAACTCGACG AGGACGAACA GCCCTGCGGG GAGCCATATC TCCCGCGGAT CCGAGCGGTG TTGAGCTGGA ACAGCAAGCC GAAGGACAAA CCCGAGAAGC TCCCCGTGTG GGGTAACCGG CTGGATGCCG ACATCCAGAT CGAACCTCAG TGGCCGACCA TCCCTGACCT CGTCGACACT GCGCTCCCCG AATCGGTCAT CGACGGGATC GACGCGGGCG AAGGGGACCC GGTCGATCCA CCACAGCTGA GTCCGTCCCA GTCACTGCTC ACGTACCAGA ACACCAGCGT CCCGCCTCAT CGCGGCGGAT TCACCGCGTT CAAGTCCGTC GTACGTGAGC CCGCGACCGC CGGCCTTGAT CTCACCACGT CGGCGCTGCA ACCCGGGGAC ATCTCCCTCT CGGATCCCGT CCCTGATCCG ATCCCGATAC CCGATCCGGA GCCCGAACCG GTTCCGATTC CCGAGCCAGA ACCCGACCCC ATTCCGATAC CCGACCCTGA ACCAGTCCCC GAGGTTCCCA TCGACATCCC GCCGGAACTC GACATCGAGA TCGGCGAGGT TCTGGAAAAC CTCGACGAAA CGTTCGAGAA CACGGGTTAC GAAGAGCTCG GCTGTGTTGG CTATCGATCC GGGCTACTCA CGGGCGTGTT CACCGTCAAG CGGCCGGCCG GGTACTCCGG TGGGCTCTGT ACGCAGGGAA GCACCGAATA CGTCGCGTTC TGGGAGAAGG ATGTCTCGGG CGGGACCTGG AACTACCTCG GGACCGGCTC GGTCAACGTC TATGACATCC CCTCGATTCC GGGCGACGGT CTCCAGTATG CGGTCCACCT GCCCGTCGAT CTCAGTCATC ATCGACAGCC ATGTCACGAC GGGCCGAGCC TGGTTCGTAT TCGCGCCGTG CTCTCCTGGG AGGACAAGCC GCCAAAGAGC AACCCCAACT TCGCACCGAC CTGGGGCAAC CACCACGAGA CGATCGTCCA GGTTTCCCCC GGTGCCGAGG CGATCGAGGA AGGCCGGCTC GCTGTCGGCA GTGTCGGGAA CATCTTCCCC GCGGACGTCA AACAGACGCC GCCAGACGCC GACGACACCG GGACCGCTAC CGGCCAGGCC GTCATGGGCG GGTTCCAGGC CAAACAGGCA CCCTTCGGCG GGTTGGTGAC GATCACCGGC CGGCCGATGG ACGGAATCGA CCCGGACGCC AGCGGAGCCG ATGCCCTCAA GTACCGGGTG TCGGTGCGGC CCTACAAACC GGGTGTTAGC GACGCCGCCA ACCCCTGGAA ACGGGTCTCC AACGAGTTCA CCGTCCGGAG TTACGACGCC CCCCGAATCA ACAGGCGGAT GCAGGTCGAC AGTGACGGCT TCTATACGTA CGTGCCGAAG GTGATCAACG ACGTCCTCGC GAAGTGGTAC ACCAGCGACG ACGGTCTCTA CGAACTGAAG GTCGAGGCAA AGCGGGGTGA CGGCGATCCG GTCCACACCG ATGTCGTGTT CGAGCCGGAC GGCACGACCG ACCGGAAGAT GCTCATCCGG TTAGACAACA CCGACCCCAC GGCCTCGATC TCGATAACGG GCGTCAAGTC CGGGTCCACA TCGGGGGGCA AGGCCGGCGA CTGTGGCTTC TTCAAGGTCG GAAACACCAT CGAGGGAACG TTCAGGGCCG ACGACAAGCG TCTGAAAGGG TATTCTTTCG ACCTTGACCC CGACGAAGAA GCCGACGATG CCAGCGTCGA AGAGACATCG GGAACGAAAG TACTGGACCG TGGCGGCGGC GACGGGACCT GGGAACTCAA AACAGACTGG GAGAATGGCA CGGTCGGCCG GATGAACCCC TGTGGGTACA CCGTTAGCAT GACCGTCTAC GACAATACGA TCGTCAACAA TCACTACGGC GGCCATCACT CGGGTGACTC CGAAGGCTTC TGTCTCCTCG CGGCCAACCA GAAGATTGTG ACTGGGGATG ATGAGGACGA CGATGGGAAC GGCTCCGGAA GTGACTCGGA CGAGGACAGT TCGAACGACG GGTAA
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Protein sequence | MHLTLGADGE AVQQLQELLA ERGYDVGEID GEYGRRTRDA VASFQREQGL EPTGSVGPDT AEELDLDVDF DMPAVPPERA KYKQLLAENP NYFGNHPELE YEPVLDITSN TDFEELTYVG YDPAAEQLEA VVSVKRDHGY GGDLCTDGSV EFVRFFIDRE RNGDWENLGV GSTRVHDLPG PKPVAYTVTL ELDEDEQPCG EPYLPRIRAV LSWNSKPKDK PEKLPVWGNR LDADIQIEPQ WPTIPDLVDT ALPESVIDGI DAGEGDPVDP PQLSPSQSLL TYQNTSVPPH RGGFTAFKSV VREPATAGLD LTTSALQPGD ISLSDPVPDP IPIPDPEPEP VPIPEPEPDP IPIPDPEPVP EVPIDIPPEL DIEIGEVLEN LDETFENTGY EELGCVGYRS GLLTGVFTVK RPAGYSGGLC TQGSTEYVAF WEKDVSGGTW NYLGTGSVNV YDIPSIPGDG LQYAVHLPVD LSHHRQPCHD GPSLVRIRAV LSWEDKPPKS NPNFAPTWGN HHETIVQVSP GAEAIEEGRL AVGSVGNIFP ADVKQTPPDA DDTGTATGQA VMGGFQAKQA PFGGLVTITG RPMDGIDPDA SGADALKYRV SVRPYKPGVS DAANPWKRVS NEFTVRSYDA PRINRRMQVD SDGFYTYVPK VINDVLAKWY TSDDGLYELK VEAKRGDGDP VHTDVVFEPD GTTDRKMLIR LDNTDPTASI SITGVKSGST SGGKAGDCGF FKVGNTIEGT FRADDKRLKG YSFDLDPDEE ADDASVEETS GTKVLDRGGG DGTWELKTDW ENGTVGRMNP CGYTVSMTVY DNTIVNNHYG GHHSGDSEGF CLLAANQKIV TGDDEDDDGN GSGSDSDEDS SNDG
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