| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2808 |
|---|
| Symbol | |
|---|
| ID | 8385115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2877825 |
|---|
| End bp | 2880962 |
|---|
| Gene Length | 3138 bp |
|---|
| Protein Length | 1045 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644973884 |
|---|
| Product | Oligosaccharyl transferase STT3 subunit |
|---|
| Protein accession | YP_003131702 |
|---|
| Protein GI | 257053869 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAT TAGACGAGTA TGTCTCTGAG GATTCATCAG CCAGTCGTGC CGCCGAATGG
CTCTTCACGT GGGGCCATGG GTTGCTCATC GCCGGCCTGT TTGGCTTCAT GTTCTGGGTC
CGGGCCAGAA CGTGGAACCG ATTCGTCGTT GACGGAAAGA TTCTGCTCAG TGGCAACGAC
GCGTGGTATC ATCTGCGCCA GATCTCGTAT ACTGTCTCGA ACTGGCCGTC GACGATGCCG
TTTGACCCCT GGACGGAGTT CCCAACCGGC ACGTTCGTCG GCCAGTTCGG GACGATCATG
GATCAACTGA TCGCCACGGC CGCACTCATC GTCGGCCTGG GGAGTCCGAG CGAAGAGCTG
ATTCGGCTCG TCACGCTGTT CTCGCCGGTT GTCTTCGGCT CGGCTATTAT CGTGCCGACG
TACTATCTCG GCAAGCGGAT GGGTGGTCGC CTCGGTGGCA TCATCGCCGC AATCGTCCTC
GCGCTGTCAT CCGGCGTCCT CCTCCAGCGG AGTCTCGTTG GGATTGCCGA CCACCAGGTC
GCCGAAGCCC TGTTTCAGGC GGTCGCAGTG CTCGGCATCG TGATTGCCGT TCGCGTTGCA
CAGGAAGAGA AGCCAGTGTA TGAACTGTTC GCCGAGCGAA ACTGGGGGGC GCTTCGGCGT
CCGCTGGGGT GGGGCGCGGT GGGTGGCGTC GGACTGGCGC TGTATCTGTG GCTCTGGCCG
CCGGCGATCC TCTTGATCGG GGTTCTTGGC GTGTACGTCA CGATCCAACT CCCCATCGTC
TACCTCCGGG GCGAAAGTCC CGAACACGTC GGGATCGTTA CGGCGACGAT TTTCGCTGTG
GCTGGCGTCC TCTCGTTACT CTCTATTCAA GCGGTCAATT TCAACATGGT CCAACTTTCG
CTGGCCCAGC CCGGACTCTC CTTTGCGGGA GCTGCGTGGT CGCTCGGGCT GGCCTGGCTC
GCGCGTGAGT GGGATCGTCG TGAGCTGTCG GCCTGGCAGT ATCCGGCAAC GGTTTTCGGT
GGGCTTGGTG TGGGAGTCGT CCTGTTCGTC CTCGTCTTGC CGGACCTCTT CTGGTACTTC
TTCGATCAGA TTCTCCGGTT CGTCGGTTTC GCGTTCAATC CACACTCGGA TTCAGCCGGC
ACTGTCGCTG AGGTCACGCC ATTACCAGGG GGTATCGATT CACTCTTGCG GTATTACGGC
GCTGTTCCAC TCATTGCCGG TGCAGGCGTC GGTATTTCTG TCATCCACCA GTATTTCAGC
GACGAACTCA AACCGGAGTT GCTGTTCGTC GGGGTGTGGT TTGTGTTCAT GCTTGCTGCC
ACACTCACGC AAAGTCGGTT TGCCGTTTAC TTCCCCGTTC CTGCCGCGAC ACTGAGCGCG
CTGGTGGTCA CATGGCTGTT CCAGCGGCTT CGATCGGTCT CCGAAAGTAG TGACCTCGAA
ACGTATCAGG TGCTGACCAT ACTTGGCGTC GTTACCGGAC TCGTCTTGCC GATGGTTCTC
GCCTCCCCAA CCGTGCTGGA AACGTCAGGC CAAAACAATC CCGGAGGCGT TGCCGGTTGG
GAGAGCAGTC TCGACTGGAT GAACGAGAAC ACGCCCGCCG TTGGCAACTA CGGTGGGGCC
GGCAACGCAG ACGAGCTTGA CTTCTATGGC ACGTACGAGC GCACTGATGA CTTCGAGTAT
CCGGACGGTG CCTACGGCGT GATCTCGTGG TGGGACTACG GCCACTGGAT CACGCAGGAA
GCTGAGCGGA TCCCGGTCGC GAATCCGTTC CAGGGCAATG CCGAGGAGGC TGCGGCGTTC
CTCATGGCAA CGAACGAATC CCAGGCCGGT GACGCATTGG AAATCGTGAG TGAAAACGAG
TCAGATGCAA CGACGCAATA CGCGATGGTC GACTGGAAAA TGGCCACGGC CAACGGAGGC
TTCCAATCCT ATCGCTGGGG GAAGTTCGGT GCCCCATCGG CGTTCTTGGA TAACGTCTCG
GCGTCGACGT ATTACCGAGT GATCAGAGGG CAGGCACAAG CTGGCGATAG TCGTCCCTCT
GTCCTCCAGC AGTGGTATAC TGTTCAGAAA CAGGCCTTCT ACGAGTCGAT GGCTGTCAGG
CTCTATCGCT ACCACGGCAG TGCCGCGTCG ACGACTGACG TCCCGGGCAT CAACACGAGA
GGTCGGATTC CAGTCGTCGA CTGGGAGCAA ACACAGCTTC TCAACCGAAG AACCGGTGAG
ACGGAACTGG CAAACGTACC AGCGAGAAAC CAGAACGGAA CGGCCCAGGC ACTCCGATGG
TTCAACAGCC GTGAGGAAGC CGAGGCCTAC GTTGCTGAGG ACGGGACGGC CCAGATTGGC
GGCCTCGGCA AGATACCGAG CGAACCCGTC TCCGCACTCA AGCACTATCG CCTGGTACAG
GTGAGCGAGC AGAATCAGGG GTCCGTTGTT GCAAGCCAGC CGGGCTTGGG CCTGCTCGTC
CAACGGAACC TACAGAATGA GCAGGTGCAG TACCAGACCG GTGTGAATTG GCGAACCCTG
CTGAGTGGAA CCCTTTCGGA GCCCTACAGC GCCTGGACGA AGACCTTCGA GCGCGTCCCC
GGCGCGACCG TCGAAGGAAC CGGTCCGGCC AACACGAACG TCACGGCGTC CGTCGAGATG
GAGATGCCAA ACGCCAACAA GACGTTCACC TACCGCCAGC ACGCCGAGAC CGGCGAGGAC
GGCGAGTTCA CGATGACGCT GCCGTACTCG ACGACGGACT ACGACGCGGT GAGCACCGAG
GACGGGTACA CGAACGTCAG CGTGCGGGCG AACGGCTCCT ACGAGTTCGC CACGTCGCCG
ACACTGGAGA CGACCAACGA GACGATGACC CAGTACGTCT ACAACGACAC CGCCGAAGTG
TCCGAGGAGC AGGTCATCGG GACCGACGAC TCGGTGGTCG AGGCCGACTT GACGAAATCC
GTCATGCTCG AACGGGATAT CAACACGACG GCGAGTGATT CGACGAACGA AACGGGCCAG
AACACGACAG ATGGGTCCGA CACGGGCGGG ACGGACGACG GCTCGACGAA CGAGACCGGG
GAGGACACAT CTGGCTCGCT GGCACCGGTC GTCGCCAGTG ACTCCTCGAC CGTTCGACCC
GTCACCACTG GAACCTAA
|
|---|
| Protein sequence | MSVLDEYVSE DSSASRAAEW LFTWGHGLLI AGLFGFMFWV RARTWNRFVV DGKILLSGND
AWYHLRQISY TVSNWPSTMP FDPWTEFPTG TFVGQFGTIM DQLIATAALI VGLGSPSEEL
IRLVTLFSPV VFGSAIIVPT YYLGKRMGGR LGGIIAAIVL ALSSGVLLQR SLVGIADHQV
AEALFQAVAV LGIVIAVRVA QEEKPVYELF AERNWGALRR PLGWGAVGGV GLALYLWLWP
PAILLIGVLG VYVTIQLPIV YLRGESPEHV GIVTATIFAV AGVLSLLSIQ AVNFNMVQLS
LAQPGLSFAG AAWSLGLAWL AREWDRRELS AWQYPATVFG GLGVGVVLFV LVLPDLFWYF
FDQILRFVGF AFNPHSDSAG TVAEVTPLPG GIDSLLRYYG AVPLIAGAGV GISVIHQYFS
DELKPELLFV GVWFVFMLAA TLTQSRFAVY FPVPAATLSA LVVTWLFQRL RSVSESSDLE
TYQVLTILGV VTGLVLPMVL ASPTVLETSG QNNPGGVAGW ESSLDWMNEN TPAVGNYGGA
GNADELDFYG TYERTDDFEY PDGAYGVISW WDYGHWITQE AERIPVANPF QGNAEEAAAF
LMATNESQAG DALEIVSENE SDATTQYAMV DWKMATANGG FQSYRWGKFG APSAFLDNVS
ASTYYRVIRG QAQAGDSRPS VLQQWYTVQK QAFYESMAVR LYRYHGSAAS TTDVPGINTR
GRIPVVDWEQ TQLLNRRTGE TELANVPARN QNGTAQALRW FNSREEAEAY VAEDGTAQIG
GLGKIPSEPV SALKHYRLVQ VSEQNQGSVV ASQPGLGLLV QRNLQNEQVQ YQTGVNWRTL
LSGTLSEPYS AWTKTFERVP GATVEGTGPA NTNVTASVEM EMPNANKTFT YRQHAETGED
GEFTMTLPYS TTDYDAVSTE DGYTNVSVRA NGSYEFATSP TLETTNETMT QYVYNDTAEV
SEEQVIGTDD SVVEADLTKS VMLERDINTT ASDSTNETGQ NTTDGSDTGG TDDGSTNETG
EDTSGSLAPV VASDSSTVRP VTTGT
|
|---|
| |