| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2292 |
|---|
| Symbol | rpl3p |
|---|
| ID | 8384590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2340894 |
|---|
| End bp | 2341910 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644973365 |
|---|
| Product | 50S ribosomal protein L3P |
|---|
| Protein accession | YP_003131192 |
|---|
| Protein GI | 257053359 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAAC CAAGCAGACC ACGCAAAGGC TCGCTGGGCT ACGGTCCGCG TACGCGGGCG
ACCAGTGAGA CGCCGCGGTT CAACAGTTGG CCCGACGACG AGGGCCAGCC GGGCGTACAG
GGCTTTGCCG GCTACAAGGC CGGCATGAGC CACGTCGTTG TCATCAACGA CGAGCCCAAC
TCACCGCGGG AGGGCATGGA GGAAACCGTG CCCGTCACTG TCGTCGAAAC CCCGCCAATG
CGGGCAGTGG CGCTGCGAGC CTACGAAGAC ACGCCGTACG GCCTGCGACC GCTCACGGAG
GTCTGGACCG ACGAGTTCCA CGAGGACCTC GACCGGGCCA TCGACCTCCC TGCAGAGCAG
GACCGCGACG GCGCAGAGGC ACAGATCAGA GACGCTCTCG ATGCGGGTCG GCTCGGGGAC
GTGCGCCTCA TTACGCACAC CGTTCCCGGC GACCTGCCGA GCGTCCCGAA GAACAAACCC
GACGTGATGG AGACACGCGT CGGCGGCGGT TCGCTTGCCG ATCGCCTCGA GCACGGCCTC
GAGCTCGTGG CCGACGGCGG CGAGTACGCC ATGACCGACG TCTTCCGCGC CGGCGAGTAC
GCCGACGTGG CGGGCGTCAC GAAGGGCAAG GGTACCCAGG GCCCCGTCAA GCGCTGGGGT
GTCCAGAAGC GAAAGGGCAA ACACGCCCGC CAGGGCTGGC GACGCCGGAT CGGCAACCTG
GGCCCGTGGA ACCCATCGCG GGTTCGCTCG ACGGTGCCCC AGCAGGGCCA GACTGGCTAC
CACCAGCGCA CCGAACTCAA CAAGCGTCTC ATCGACTTCG GCGACGAGGA CGACGTCACC
CCCGACGGTG GCTTCGTCAA CTACGGCGAA GTCGAGGGGA ATTACGCGCT GATCAAGGGC
TCGATTCCCG GGCCCGACAG CCGTCTGGTT CGCCTGCGCC CGGCCGTTCG GCCGAACGAC
CAGCCGCGCC TCGACCCCGA GGTACGGTAC GTCTCCACTG AATCCAACCA GGGGTGA
|
|---|
| Protein sequence | MPQPSRPRKG SLGYGPRTRA TSETPRFNSW PDDEGQPGVQ GFAGYKAGMS HVVVINDEPN
SPREGMEETV PVTVVETPPM RAVALRAYED TPYGLRPLTE VWTDEFHEDL DRAIDLPAEQ
DRDGAEAQIR DALDAGRLGD VRLITHTVPG DLPSVPKNKP DVMETRVGGG SLADRLEHGL
ELVADGGEYA MTDVFRAGEY ADVAGVTKGK GTQGPVKRWG VQKRKGKHAR QGWRRRIGNL
GPWNPSRVRS TVPQQGQTGY HQRTELNKRL IDFGDEDDVT PDGGFVNYGE VEGNYALIKG
SIPGPDSRLV RLRPAVRPND QPRLDPEVRY VSTESNQG
|
|---|
| |