| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1400 |
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| Symbol | |
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| ID | 8383679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1371611 |
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| End bp | 1373164 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644972463 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003130309 |
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| Protein GI | 257052476 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.587173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG GCCGCGAGCC CTCGGGTATG CAGTATTCGA ATCCAGTGCT TCCGGGCATG
CATCCCGATC CGACGATCGC GCGCGCCGGC GAGGACTTCT ACCTCGCCAT CTCCTCGTTC
GAGTACTTCC CGGGCGTCCC GCTGTTTCAC AGCACGGACC TGGTCTCCTG GGAGCGGGTC
GGCCACTGTC TCACCCGCGA CAGCCAGCTT GACCTCCGCG GTCGCGAGGC TTCCGACGGG
ATCTACGCCC CGACCTTGCG CCACCACGAC GGCACCTTCT ACATGGTCAC GACCGACGTC
GGCGGCGACA ACGGTGGCCA CTTCATCGTG ACCGCCGACG ATCCCGCCGG CGAGTGGTCC
GATCCGCTGT ACGTCGACGC GGGCGGGATC GATCCCGATC TCTTCTTCGA CGACGATGGG
ACGGCCTACT TCCAGTACAC CGACGGCGAG TCCTTGCCGG AGTACCGGGT CCGACAGGCC
GAGATCGACC TCGACACCGG TGAACTCGGC GACGTCCGCC AGCTCTGGCG GGGCATCGAA
GGCGGGTTCG CCGAAGCGCC CCACATCTAC GAACGCGACG GGACCTACTA CCTCATCACC
GCCGAGGGCG GGACCCACAC GGATCACATG GTCACCGTCG GCCGGAGCGA CGACCCGACG
GGCCCGTTCG AACCCCATCC CGACAACCCC GTGCTCTCCC ATCGCGGTCG GCCGATGCAC
CCGCTCAGCG CGATGGGCCA CGCCGACATG GTCCAGGCCC CGGACGGCTC GTGGTGGATG
GTGTTCCTCG GGATCCGCCA GTACGGCCCG AACCCTGGCG TCCACCACCT GGGCCGGGAG
ACGTTCCTCG CACCCGTCAC CTGGGAGGAC GGCTGGCCGA TCGTCAACGA CGGCGAGCCG
ATCGACCCCG AGATGACCGT CGAGTCGCTG CCCGGCGATT CACCCGGCGG GCTGTCGAGT
CCGGCCCGAC CGTTCGAGAC GACCTTCGAC GGCGAACTCG ACGACAGCTG GCAGTTCCGA
CGGAACCCGG ACCCGGCGAC GTATTCACTT TCGGACGACG GACTGTCACT CGTGGGCAAA
ACCGACAGCC TCGACGAGTT GGATGCGACG TTCGTCGGCC GCCCGCAGTC CCACTTCGAT
TGCCGAGCCG AGATCGATCT CGGGTTCGAT CCCGACGACG GCGAGGAGGC CGGTCTCGCG
CTCGTGATGA ACGAGTCCCA CCACTACGAG ATCGGCGTGG GTCGTGAGGG TGGCGAGACG
GTCGCCCGCG TCCGACTCCG GATCGGCGAG GTTGCTGACG AGGTCGCAGC TGTCCCCGTC
GGGGGCGAGG ACCACCGGCT GGTCGTCGAC GCGACGACTG AGGAATACAC GTTCCGCTAC
GCCGACGGCG ACGGCGAACC GACCGAACTC GCCACGGCGG CCACACGGTA CCTGTCGACG
GAAGTCGCGG GCGGGTTCAC CGGCGTCTAT ATCGGTCCGT ACGCACTTGG AGCAGGAACA
GAAACGGCAA CGCCGGCCCA GGTCCAGCGC TTCGTATACG AGCCGGCGGA GTGA
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| Protein sequence | MSDGREPSGM QYSNPVLPGM HPDPTIARAG EDFYLAISSF EYFPGVPLFH STDLVSWERV
GHCLTRDSQL DLRGREASDG IYAPTLRHHD GTFYMVTTDV GGDNGGHFIV TADDPAGEWS
DPLYVDAGGI DPDLFFDDDG TAYFQYTDGE SLPEYRVRQA EIDLDTGELG DVRQLWRGIE
GGFAEAPHIY ERDGTYYLIT AEGGTHTDHM VTVGRSDDPT GPFEPHPDNP VLSHRGRPMH
PLSAMGHADM VQAPDGSWWM VFLGIRQYGP NPGVHHLGRE TFLAPVTWED GWPIVNDGEP
IDPEMTVESL PGDSPGGLSS PARPFETTFD GELDDSWQFR RNPDPATYSL SDDGLSLVGK
TDSLDELDAT FVGRPQSHFD CRAEIDLGFD PDDGEEAGLA LVMNESHHYE IGVGREGGET
VARVRLRIGE VADEVAAVPV GGEDHRLVVD ATTEEYTFRY ADGDGEPTEL ATAATRYLST
EVAGGFTGVY IGPYALGAGT ETATPAQVQR FVYEPAE
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